| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0486 |
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| Symbol | |
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| ID | 3970248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 525540 |
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| End bp | 527102 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923602 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_530380 |
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| Protein GI | 90422010 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.5834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0840581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CAGGCGCAGC CCCGGTTGCA GTTCCAGGTC TGCGCCGCAA CATGGTGACG
ATCTGCGCCA TGACCGCGAC CATCATGCAG GCGCTCGACA CCACGATCGC CAACGTCGCG
CTGCCCTATA TGCAGGGCTC GCTGTCGGCG TCGCAGGATC AGATCAACTG GGTGCTGACC
TCCTACATCG TCGCCGCCGC GATCATGACC GCGCCGGTCG GCTGGGTCGC CAATCGCTTC
GGCAGGAAGC GCATCTTCAT CATCTGCTCG GCCGGCTTCA CCATCGCCTC GGTGATGTGC
GGGCTCGCGC AAGATATCAC CCAGATGGTG GCGTTCCGGC TGCTGCAGGG CGTGTTCGGC
GCAGCATTGG TGCCGCTGTC GCAATCGGTG ATGCTCGACA TCTACGCGCT GCACGAGCGC
GCCAAGGCGA TGTCGATCTG GGGCATGGGG GTGATGCTGG GGCCGATCAT GGGGCCGTCG
CTCGGCGCCT GGCTGACCGA GACCTATTCC TGGCACTGGG TGTTCTTCGT CAACCTGCCG
TTCGGCATCG TCACGGTGGC GGGACTGTTA GTCTTCATGG ACGAAACCAA ACTGAACCAC
GCGCTGCGGT TCGACTGGTT CGGCTTCGCA GCCCTTGCAA TCGGCATCGG CGCGATGCAG
CTCGCGCTCG ACCGCGGCGA GCAGCTCGGC TGGCTGGAAT CCGGCGAGAT CATCGCCGAA
TGTATCGTCT CGGTGATCGG CTTCTATTAC TTCTTCGCGC ATTCCTTCAC CACGCCGAAG
CCGTTCATCC AGTTCGCGAT CTTCACGGAC AAGAATTTCA TCGGCGGCTG CGTGTTCATG
GCGGTGATGG GCTTGGTGCT GTTCTCCACC ATGGCGCTGT CGTCGCCGTT CATGCAGAAC
GTGATCGGCT TTCCGATCCT CACCGCCGGG CTACTGCTGG CCACCCGCGG CACCGGCACC
TTCGTGGCGA TGATGATGGT GGGGCGGATC ATGCGCCATA TCGAGGCGCG CACGCTGATC
GCCGGCGGGC TGACGCTGAC CTGCGCCACC TTGTACTTCA TGACGCAGTG GACCGACCAG
ACCAGCGTTT ACAGCATCAT CGTGGTCAGC ATCGCGCAGG GCTTCGGCTT CGGGCTGGTG
TTCGTGCCGC TGTCGACGGT GGCGTTCCTG ACGCTGCCCG GCCATCTGCG CACCGACGGC
ACCGCGATGC TGACGCTGGT GCGTAACGTC GCCTCCTCGA TCGGCATCTC GGTGGTGATC
GCCGAACTGA CCTCGGGGAC GCGACGGGCG CATGCGGTGC TGACCGAATA CGTCACCCCG
TTCAACCACG CGATGCAGAT GCCGGACGTC CGCGGCACCA TCGACATGGC GACCGACACC
GGGCGGGCGA TGATGGACGG CATCGTCACC ATGCAGGCGC AGATCATCGC GTTCTCGCAG
GACTACGCGC TGGTGATGTT CCTCACCGCG GCGGCGATCC CGGCGGCGAT CATCATCGGC
TCCACCAAGG CGACGCTGCG CCAGCAGTCC AAGGGACCCG ACCACGCCGC GGTGATCGAT
TAG
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| Protein sequence | MTTAGAAPVA VPGLRRNMVT ICAMTATIMQ ALDTTIANVA LPYMQGSLSA SQDQINWVLT
SYIVAAAIMT APVGWVANRF GRKRIFIICS AGFTIASVMC GLAQDITQMV AFRLLQGVFG
AALVPLSQSV MLDIYALHER AKAMSIWGMG VMLGPIMGPS LGAWLTETYS WHWVFFVNLP
FGIVTVAGLL VFMDETKLNH ALRFDWFGFA ALAIGIGAMQ LALDRGEQLG WLESGEIIAE
CIVSVIGFYY FFAHSFTTPK PFIQFAIFTD KNFIGGCVFM AVMGLVLFST MALSSPFMQN
VIGFPILTAG LLLATRGTGT FVAMMMVGRI MRHIEARTLI AGGLTLTCAT LYFMTQWTDQ
TSVYSIIVVS IAQGFGFGLV FVPLSTVAFL TLPGHLRTDG TAMLTLVRNV ASSIGISVVI
AELTSGTRRA HAVLTEYVTP FNHAMQMPDV RGTIDMATDT GRAMMDGIVT MQAQIIAFSQ
DYALVMFLTA AAIPAAIIIG STKATLRQQS KGPDHAAVID
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