Gene RPC_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0473 
Symbol 
ID3970235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp510669 
End bp511085 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID637923589 
ProductXRE family transcriptional regulator 
Protein accessionYP_530367 
Protein GI90421997 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.54052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACTA AAGCGCCCAA CCCTGTTGAC AAATATGTCG GCAGCCGTGT GCGCATGCGG 
CGCATCATGC TCGGCATGAG TCAGGAAAAA CTTGGCGAAG CGCTCGGGCT GACGTTCCAG
CAAGTTCAGA AATACGAAAA GGGCACCAAC CGCGTTGGCG CCAGCCGCAT CCAGCAGATC
TCCGAGATTC TGCAGGTGCC GGTGTCGTTC TTGTTCGAAG GAGGTCCGGG TGGTCTGGCC
AAAGCCGACG GTTTCGCCGA AGCGGCGTCG CCGGCCTATG TGTCGGATTT TCTCGCCACC
TCCGAAGGCC TGGCGCTGAC CCGCGCGTTC ACGCGGATCA CCGATTCCAA GCTGCGTCGA
AGCATCGTCG ATCTGGTCGA ACAGATCGCC TCGCGCGAAG CGCCCGATCA ACGCTGA
 
Protein sequence
MSTKAPNPVD KYVGSRVRMR RIMLGMSQEK LGEALGLTFQ QVQKYEKGTN RVGASRIQQI 
SEILQVPVSF LFEGGPGGLA KADGFAEAAS PAYVSDFLAT SEGLALTRAF TRITDSKLRR
SIVDLVEQIA SREAPDQR