| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0453 |
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| Symbol | |
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| ID | 3970215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 487129 |
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| End bp | 489402 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923569 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_530347 |
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| Protein GI | 90421977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.287636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTGGG GCAAGAAGAA AGGCAGCGCG CGGCAGGAGC CGGTGTTCGA CTTGTCGTCG
TCGCTGTCCG GCCTGCGGCT GTCGGTGCAG GACCGCATCG GACCGCCCGA CGAAAAGCTG
ATCAAGCCGA AAGCCGACGC GGCGAAGAAA GCCGACGCCA AGAAGCCGGC GGGCAAATCG
CCGAAAAAAC CCAAGAGCAA GCCGCGCGGC CGGATCAGCG CGGCGATCTT CAAACTGTTC
TATTGGGGCG CGGTCACCGC GATCTGGGGC GTAATCGCGG TGGTCGGCCT CTTGATCTAT
GTCGGCGCGC ATCTGCCGGC AATCCAGTCC TTGGAAATCC CGAAACGGCC GCCGACCATC
CAGATCGTCG GCTTCGACGG CAGCGTCTTG GCGACACGCG GCGAACAGGC CGGCACCAAT
ATCGCGTTGA AGGATGTGCC GCCCTATCTG CCGAAGGCCT TCATCGCCAT CGAGGACCGC
CGCTTCTACG ATCATTACGG CGTCGACCCG ATCGGCATCG CGCGGGCCGC CGCCGCCAAC
ATCGCGCATC GCGGGGTGTC GCAGGGCGGC TCGACGCTGA CCCAGCAGCT CGCCAAGAAC
CTGTTCCTGA CCCAGGAACG CACGCTGCAG CGCAAGCTGC AGGAGGTCGA GCTGGCGCTA
TGGCTGGAGC GCAAGCATTC CAAAAGCGAA ATTCTCGAAC TCTATCTCAA CCGGGTGTAT
TTCGGCTCCG GCGCCTATGG GGTGGAAGCC GCGGCACAGC GCTATTTCGG CAAATCGGCG
AAAAACGTCA CGCTGGCGGA AGCCGCGATG CTGGCCGGCC TGGTCAAATC GCCGTCGCGG
TTGGCGCCGA ACCGCAATCC GGAAGGCGCC GAAAACCGCG CCAAGACCGT GCTCGGCGCG
ATGGCCGACG CCGGCTTCAT CACGCCGGCG CAGGCCCAGG TGGCGAGCGC CAACCCGTCC
GGCACGGTGA AGCCGTCCGG CGCCGGCACC ATCAACTACG TCGCCGACTG GATCGGCGAA
GTGCTCGACG ATCTGGTCGG CCAGATCGAC CGTTCGATCA TCGTCGAGAC CTCGATCGAT
CCGAAGCTGC AATCGGTGGC GGAGGCCGCG ATCATCGACG AATTGGCGGC GAAGAGCGTC
AAGTTCAACG TCTCGCAGGG CGCGCTGGTG GCGATGACGC CGGACGGCGC GGTGCGCGCC
ATGGTGGGCG GACGCAACTA CGCCGACAGC CAGTTCAACC GCGCGGTCAC CGCCAAGCGA
CAGCCGGGCT CGGCGTTCAA ACCGTTCGTC TATCTCACCG CGCTCGAGGC CGGGCTGACG
CCCGACACCA TCCGGCAGGA CGCCCCGATC GACGTCAAGG GTTGGCGACC GGAGAACTAC
AGCCACGAAT ATTTCGGCGC GGTGACGCTG ACGCAGGCGC TGGCGATGTC GCTCAACACC
GTGGCGGTGC GGCTCGGGCT GGAAGTCGGC GCCAAGAGCG TGGTGCGCAC CGCGCACAGG
CTCGGCATCG CCTCCAAGCT CGACGCCAAC GCCTCGATCG CGCTCGGCAC CTCCGGGGTG
TCGCTGGTCG AACTGGTCGG CGCCTATGCG CCGTTCGCCA ATGGCGGGCT CGGCACCGCG
CCGCATGTGG TGGAGAAGAT CCGCACCGCC GACGGCAACA AGGTGTTGTA CGACCGGCCG
CAGGACGCGC CCGCGCAGGT GATCGAGCCG CGCTATGTGG CGATGATGAA CAGCATGATG
CAGGAGACGC TGATTTCCGG CACCGCCCGC AAGGCCGAGA TTCCGGGTTG GACCGCGGCA
GGCAAGACCG GCACCAGCCA GGATTTCCGC GACGCCTGGT TCATCGGCTT CACCAGCAAA
CTGGTCACCG GGGTGTGGCT CGGCAATGAC GACAACGCGC CGACCAAGAA GGCCACCGGC
GGCGGTCTGC CGGTCGAGGT GTGGACCAGG TTCATGCGCA CGGCGCATCA GGGCCAGACT
CCGCTGCCGC TGCCAGGCGC CGGACAGACC GGAGCCGGCA TCGCCACGGT GGCGCAGGTC
GGTTCGCGCG GCGATCCGGG TTTGCTGCAG CAGGGCACGG CTCAGCAGGG TTATGCGTCG
CAGCCCGGTT ATGCCGCATC GGGCCCGGGC GGGTCGAACT ATCAGCAGGC GCCGAGCCCG
CCGATCCCGG TCAACGGCGG CGGCCGCAGC GCGCCGCAGC GCGCGCAGAC CACCCGGCCC
GAAGCCGCCG GCGGCCTCGA CGGCTGGCTG GTGGAGCGAT TGTTCGGGCG GTAG
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| Protein sequence | MAWGKKKGSA RQEPVFDLSS SLSGLRLSVQ DRIGPPDEKL IKPKADAAKK ADAKKPAGKS
PKKPKSKPRG RISAAIFKLF YWGAVTAIWG VIAVVGLLIY VGAHLPAIQS LEIPKRPPTI
QIVGFDGSVL ATRGEQAGTN IALKDVPPYL PKAFIAIEDR RFYDHYGVDP IGIARAAAAN
IAHRGVSQGG STLTQQLAKN LFLTQERTLQ RKLQEVELAL WLERKHSKSE ILELYLNRVY
FGSGAYGVEA AAQRYFGKSA KNVTLAEAAM LAGLVKSPSR LAPNRNPEGA ENRAKTVLGA
MADAGFITPA QAQVASANPS GTVKPSGAGT INYVADWIGE VLDDLVGQID RSIIVETSID
PKLQSVAEAA IIDELAAKSV KFNVSQGALV AMTPDGAVRA MVGGRNYADS QFNRAVTAKR
QPGSAFKPFV YLTALEAGLT PDTIRQDAPI DVKGWRPENY SHEYFGAVTL TQALAMSLNT
VAVRLGLEVG AKSVVRTAHR LGIASKLDAN ASIALGTSGV SLVELVGAYA PFANGGLGTA
PHVVEKIRTA DGNKVLYDRP QDAPAQVIEP RYVAMMNSMM QETLISGTAR KAEIPGWTAA
GKTGTSQDFR DAWFIGFTSK LVTGVWLGND DNAPTKKATG GGLPVEVWTR FMRTAHQGQT
PLPLPGAGQT GAGIATVAQV GSRGDPGLLQ QGTAQQGYAS QPGYAASGPG GSNYQQAPSP
PIPVNGGGRS APQRAQTTRP EAAGGLDGWL VERLFGR
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