Gene RPC_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0423 
Symbol 
ID3970818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp454432 
End bp455160 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content69% 
IMG OID637923538 
Producthypothetical protein 
Protein accessionYP_530317 
Protein GI90421947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.526011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGG TGTCGGATCA GATTGAAATC TTGGAGGCGT CGGCGTGGAG CAAGGTCGGC 
AGTCAGGCCG GCTCCAACCC CGGCGGCATC TACCAAGACG ACGGTGGCGT CCGCTGGTAC
GTCAAGACGC CGAACACCGC CGACCACGCC CGCAACGAGG TGCTGGCCAA CCGGCTGTAT
CGGCTGGCCG GCGTCGCGGT GCCCGACGTC GAACTGGCTT GGCGCGACGG CGATCTGGCG
GTGGCGAGCC GCATGGTCAA GGGCCTGATG CTGGCGGAGC TGCCGGAGCA TCTGTCGGAG
CAGGCCGCGG TCCGCGTCGG CGAGGGCTTC GCCGCCGATG CCTGGCTGGC CAACCGCGAC
GCGCTCGGCG TCGACCTCGA CAACATGATC GTCACCGCCG CCGGCGCGGT GATCCGCATC
GATCAGGGCG GCGCGCTGCG CTATCGCGCG CAGGGCTCGC TGAAGACCGA ATTCGGGCCG
ATCGTGGTGG AGTTCGAGAC GCTGCGCGAC CGCCGCAAGA ACGCGGTGGC GGCGAGCTTC
TTCGGTGCGC TGACACAGCA ACAACTGCTG TCGTCGCTGC GCCGCGTGAC GCAGATCGGC
ACCGCCGCGA TCGCCGCCGC CGTGAACGGC ATCTATGGCG ACGGCGCCGA GTCCAGTCGG
CTCATCGATA CACTGATCGC GCGCCGCGAC GATCTCGCGC AACGCGCCCA ACGCCTCGAG
GCCAAGTGA
 
Protein sequence
MPVVSDQIEI LEASAWSKVG SQAGSNPGGI YQDDGGVRWY VKTPNTADHA RNEVLANRLY 
RLAGVAVPDV ELAWRDGDLA VASRMVKGLM LAELPEHLSE QAAVRVGEGF AADAWLANRD
ALGVDLDNMI VTAAGAVIRI DQGGALRYRA QGSLKTEFGP IVVEFETLRD RRKNAVAASF
FGALTQQQLL SSLRRVTQIG TAAIAAAVNG IYGDGAESSR LIDTLIARRD DLAQRAQRLE
AK