| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0414 |
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| Symbol | |
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| ID | 3970866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 445229 |
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| End bp | 445834 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923529 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_530308 |
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| Protein GI | 90421938 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTC GGGTCTCCGG CAAGAGCATC AGTGTCGGCG AAGCGTTGCG CGGCCGCGTC
AGCGAGCGCA CCGACGAGGT GCTGCGCAAG TATTTCGACG GCAACTATTC CGGCCACATC
ACCCTCAGCA AGGACGGCTT CGGCTTTCGC ACCGATTGTG CGCTGCACCT CGATTCCGGG
ATCACGTTGG AAGCCGAATC CAACGCCGCC GACGCATATG CCAGCGCCGA CCAGGCGCTA
TTGCAGATCG AAAAGCGGCT GCGCCGCTAC AAGAGCCGGC TGAAGGATCG CTCGGCCCGA
AAGATCCACG CCGCCGCCGC CGCGGTGGCG GAACTCGGCA GCGCGACGCT GGACGCGCCA
AGCTACGTCA TCGAGGCGCC CGACACCGAA ACCGAGATCG CCGATGAGGG CTACAACGCC
GTGATCATCG CCGAAGCCAC CACCTCGCTG AAGCGGTTGT CGGTTTCGGA AGCGGTAATG
GAATTGGACC TCACCGGGGC GCCGGTGGTG GTGTTTCTTC ATGGCGGCAG CGGCCGGGTC
AACGTCATTT ATCGGCGGCC GGACGGCAAT GTCGGCTGGG TCGATCCGCC GGTGGTGCCC
AGCTGA
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| Protein sequence | MTIRVSGKSI SVGEALRGRV SERTDEVLRK YFDGNYSGHI TLSKDGFGFR TDCALHLDSG
ITLEAESNAA DAYASADQAL LQIEKRLRRY KSRLKDRSAR KIHAAAAAVA ELGSATLDAP
SYVIEAPDTE TEIADEGYNA VIIAEATTSL KRLSVSEAVM ELDLTGAPVV VFLHGGSGRV
NVIYRRPDGN VGWVDPPVVP S
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