Gene RPC_0329 details

Gene Information

• Locus tag: RPC_0329
• Symbol: dnaK
• ID: 3971010
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 350281
• End bp: 352179
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637923443
• Product: molecular chaperone DnaK
• Protein accession: YP_530223
• Protein GI: 90421853
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.813132
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAAGG TCATTGGGAT CGATCTCGGC ACCACCAACT CGTGCGTCGC CGTCATGGAT 
GGCAAGGCGC CGAAAGTTAT CGAGAATGCC GAGGGCATGC GCACCACCCC CTCGATCGTC 
GCGTTCAGCG ATGACGGCGA GCGGCTGGTC GGTCAGCCGG CGAAGCGCCA GGCGGTGACC 
AATCCCGAGC GCACCTTCTT CGCGGTGAAG CGCCTGGTCG GTCGTCGCTA CGATGACCCG 
ATGGTCGAGA AGGACAAGAA GCTCGTCCCC TACAAGATCG TCAAAGCCTC CAACGGCGAC 
GCCTGGGTCG AAGCCGACGC CAAGACCTAT TCGCCCTCGC AGGTCTCGGC CTTCATCCTG 
CAGAAGATGA AGGAGACCGC GGAAGCCCAT CTCGGCGCCA AGGTCGATCA GGCGGTGATC 
ACCGTCCCCG CTTATTTCAA CGACGCGCAA CGTCAGGCCA CCAAGGACGC CGGCAAGATC 
GCCGGCCTTG AAGTGCTGCG CATCATCAAC GAGCCGACCG CGGCCGCGCT GGCCTACGGC 
CTCGACAAAG CGAAGGCCGG CGTCATCGCG GTGTACGATC TCGGCGGCGG CACCTTCGAC 
GTTTCGATCC TGGAGATCGG CGACGGCGTG TTCGAAGTGA AGTCGACCAA CGGCGACACG 
TTCTTGGGCG GCGAAGATTT CGACATGCGG CTGGTCAGCT ACCTGGCCGA CGAATTCCAG 
AAGGAGCAGG GCATCAACCT GCGCAACGAC AAGCTGGCGC TGCAGCGGCT GAAGGAAGCC 
GCCGAAAAGG CCAAGATCGA ATTGTCGTCG ACCACCCAGA CCGAAATCAA CCTGCCGTTC 
ATCACCGCGG ATCAGTCCGG TCCGAAGCAT CTGACCATGA AGCTGACCCG CGCCAAGTTC 
GAAGCGCTGG TCGACGATCT GGTGCAGAAG ACCATCGAGC CGTGCCGCAA GGCGCTGAAG 
GACGCCGGCC TCACCGCCGG TGAAATCGGC GAAGTGGTGC TGGTCGGCGG CATGACCCGG 
ATGCCCAAGG TGCAGGAAGT CGTCAAGCAG CTGTTCGGCA AGGAGCCGCA CAAGGGCGTC 
AACCCGGATG AAGTCGTCGC CATCGGCGCC GCGATCCAGG CCGGCGTGCT GCAGGGCGAC 
GTCAAGGACG TGCTGCTGCT CGACGTCACC CCGCTGTCGC TGGGCATCGA GACGCTGGGC 
GGCGTGTTCA CCCGCATCAT CGAGCGCAAC ACCACGATCC CGACCAAGAA GAGCCAGGTG 
TTCTCGACCG CCGAAGACAA CCAGAATGCG GTCACCATCC GGGTGTTCCA GGGCGAGCGC 
GAAATGGCCG CCGATAATAA GATCTTGGGC CAGTTCGATC TGATGGGGAT TCCGCCGTCG 
CCGCGCGGCA TGCCGCAGAT CGAAGTCACC TTCGACATCG ACGCCAACGG CATCGTCAAC 
GTCTCGGCCA GGGACAAGGC CACCGGCAAG GAACAGCAGA TCCGCATCCA GGCCTCGGGC 
GGGTTGTCCG AAGCCGACAT CAACAAGATG GTCAAGGACG CCGAGATCAA CGCCGCGGAA 
GACAAGAAGC GGCGCGAGGC GGTGGATGCC AAGAACCACG CCGATGCGCT GGTTCACACC 
ACCGAGAAGG CGTTGGCCGA ACACGGCGCC AAGGTCGAAG AGGGCGAACG CCGCGCCATC 
GAGGACGCGC TGGGCGATCT GCGCGAAGCC CTGAAGGGCG ACGACGCCGA AGCCATCAAG 
GCGAAGTCCA ACACGCTGGC GCAGGCTTCG ATGAAGCTCG GCGAAGCGAT GTATAAGCAG 
CAGGCCGAGG CCGACGCCGC CAAGGACGCC GCCAAGGACG ACGTGGTCGA CGCCGAATTC 
ACCGAAGTCG ACGACGACAA GCCCAAGAAG TCGGCGTGA 

 

Protein sequence

MGKVIGIDLG TTNSCVAVMD GKAPKVIENA EGMRTTPSIV AFSDDGERLV GQPAKRQAVT 
NPERTFFAVK RLVGRRYDDP MVEKDKKLVP YKIVKASNGD AWVEADAKTY SPSQVSAFIL 
QKMKETAEAH LGAKVDQAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG 
LDKAKAGVIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDMR LVSYLADEFQ 
KEQGINLRND KLALQRLKEA AEKAKIELSS TTQTEINLPF ITADQSGPKH LTMKLTRAKF 
EALVDDLVQK TIEPCRKALK DAGLTAGEIG EVVLVGGMTR MPKVQEVVKQ LFGKEPHKGV 
NPDEVVAIGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRIIERN TTIPTKKSQV 
FSTAEDNQNA VTIRVFQGER EMAADNKILG QFDLMGIPPS PRGMPQIEVT FDIDANGIVN 
VSARDKATGK EQQIRIQASG GLSEADINKM VKDAEINAAE DKKRREAVDA KNHADALVHT 
TEKALAEHGA KVEEGERRAI EDALGDLREA LKGDDAEAIK AKSNTLAQAS MKLGEAMYKQ 
QAEADAAKDA AKDDVVDAEF TEVDDDKPKK SA