Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0318 |
Symbol | |
ID | 3971038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 339356 |
End bp | 340408 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923432 |
Product | diguanylate cyclase |
Protein accession | YP_530212 |
Protein GI | 90421842 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTC ATCGTCTCCA GCCTACGGCA TCGAGCGCTG CCGAAATGAC CGCGGCTCTG CAATCCCAGG TCGACGCGCA GGCAGCGCTG ATCCGGGAGC TGAGCGCGTC GCTCGCCCAT AGCCGGAAAA TCTTCGATCG CTCCTCGGCC GCGGCCCGGA TCGGCGTCTG GGAATGCACG CTGCCCGACG AGTCGCTGTC GTGGACCGAT GTGGTCTACG ATCTTTTCGA CCTGCCGCGC GGCGCGGTGC TCAATCGCCG CCAGCTGCTG GACTGCTATC CAGAAGAATC GGCCCGAGCG TTGCACCGAC TGCGCAGCAG CGCCATCGAA CAGCTCAGCG GCTTCAGCCT TGATACCGAG ATCGTCACCG TCAAGGGCAA CCGGCGCTGG ATCCGGATCA CCGCGACGGT GGAGTCCGAG GACGGCGTTG CGGTGCGCAT CTTCGGCATC AAGCAGGACA TCACCGACGA GAAAATTCTC GCCGACCGCA CCCGCTACCT CGCCGAATTC GACGTCGTCA CCGGGCTCGC CAACCGCGGC CGGTTTCAAT CGACGCTGGC GCAGCTCGAC GAGGCGGCCG ACGCCCGACC GTTCGGTGCG CTGCTGTTGG TCGACCTCGA CGAGTTCAAG GCGGTCAATG ATTGCTTCGG TCACGCCGCC GGCGACGAAT GCCTGAAGCA GGCTGGACAA CGCATCAGCA AGGCCTGCGG CGACGCCAGG CTGGTGGCGC GGTTCGGCGG CGATGAATTC GCCGTGCTGC TGGGATCTCA CCAGCGGTTC GCGGAGATTT CCGAGATCGC CCGCAGCATC ATCGAAGAGA TGCGTCGTCC GATCGTCTTC CATGGCCACG AGCTGCAGCT TGGTGCCTCC GTCGGCGTTG CCCTGGTCGA TGGCTGCACG GCGTCGCAAC TTTTTGTCAT GGCCGACAAG GCGCTCTATG CGGCGAAAGA GGCCGGCCGC GGCACGTTCC GGATTCACAA GCCCGGAACG GGCGGGCGAA CGGCGGCCGT GACGCGACCG CCGGGCGGAC CGCGCCGGAT CCTGCGCGGC TGA
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Protein sequence | MPLHRLQPTA SSAAEMTAAL QSQVDAQAAL IRELSASLAH SRKIFDRSSA AARIGVWECT LPDESLSWTD VVYDLFDLPR GAVLNRRQLL DCYPEESARA LHRLRSSAIE QLSGFSLDTE IVTVKGNRRW IRITATVESE DGVAVRIFGI KQDITDEKIL ADRTRYLAEF DVVTGLANRG RFQSTLAQLD EAADARPFGA LLLVDLDEFK AVNDCFGHAA GDECLKQAGQ RISKACGDAR LVARFGGDEF AVLLGSHQRF AEISEIARSI IEEMRRPIVF HGHELQLGAS VGVALVDGCT ASQLFVMADK ALYAAKEAGR GTFRIHKPGT GGRTAAVTRP PGGPRRILRG
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