Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0289 |
Symbol | gidB |
ID | 3971048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 309257 |
End bp | 309961 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923403 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_530183 |
Protein GI | 90421813 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.919787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCAAC GTTCGCAGAA ATCGCCGCCG CCGCCGGAGC TTGCCGCCGA TAAGGCCGCG GCGCTCAGGC TCACGCCTGT TTCACGTGAA ACAGAAGCGC GGCTCGACGC CTATGTGGCG CTGCTGCTGC AGTGGCAGGC CAAGACCAAC CTGATTTCGC CGGCGACGCT GCCGCAACTC TGGACCCGGC ACGTCGCCGA TTCGCTGCAG CTGCTGCGGT TGGCGCCGGA CGCCAAAACC TGGCTCGATT TCGGCAGCGG CGGCGGCTTT CCCGGCGTGG TGCTGGCCTG TGCGCTGGCC GAGAGCGCCG GCGGGTCGGT GCAGCTGGTC GAGCGCAACG TCAAGAAGGC GGCGTTTTTG CGCGAAGCGC TGCGCGTCAC CGGCGGCGCC GGACAAGTTA TCCTCGCGGA TATCGGGGAT AGTGTGGATA GATTTGCCGG GCAGGTCGAT TGCGTCACCG CGCGCGCGGT GGCTCCGCTA CACCAACTCA TCGGTTTCGC CAAACCCTTG ATCCGGCAGG GCGCCAAGGC CCTGTTCCTC AAGGGTCAGG ATGTAGACGC GGAATTGACC GAAGCCACTA AATCTTGGAA GTTTAGCCCA CGCCTGCATC CCAGCCTCAC CGGCGGACAG GGCTGGATCG TCGAGCTCGG CGCCGTCGAG CCCCAGGATC AGTCCGCCCC AACACCCCAT GGCGCATCCG TATGA
|
Protein sequence | MAQRSQKSPP PPELAADKAA ALRLTPVSRE TEARLDAYVA LLLQWQAKTN LISPATLPQL WTRHVADSLQ LLRLAPDAKT WLDFGSGGGF PGVVLACALA ESAGGSVQLV ERNVKKAAFL REALRVTGGA GQVILADIGD SVDRFAGQVD CVTARAVAPL HQLIGFAKPL IRQGAKALFL KGQDVDAELT EATKSWKFSP RLHPSLTGGQ GWIVELGAVE PQDQSAPTPH GASV
|
| |