Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0282 |
Symbol | |
ID | 3971041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 299926 |
End bp | 300585 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637923396 |
Product | hypothetical protein |
Protein accession | YP_530176 |
Protein GI | 90421806 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.118746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAG CGGCGGGCCT CGCCGAGGTC GAGCGGCAGA TCGCGCGGGC CTGCGCCGAC GCCGGCCGCG AGCGCGCGGC GGTGACGCTG ATCGCGGTGT CGAAGACCTT CGAGGCCGAC GGCATCACCC CGGTGCTTGA GGCCGGGCAA CGGGTGTTCG GCGAAAACCG CGTGCAGGAG GCCAAGGGAA AATGGCCGGC GCTGACCGCG GCCTATCCGG GCGTCGCGCT GCATCTGATC GGCCCCTTGC AATCCAACAA GGCCAAGGAG GCGGTGGCGC TGTTCGACGC CATCCATTCG GTGGACCGGC CGAGCCTGTG CCAGGCGCTG GCCAAGGAAA TCGCCGCGCA GGGTCGCGCG GTCGAGCTGT TCGTGCAGCT CAACACCGGC GAGGAGCCGC AAAAGGCCGG GGTAGTGCCG GCCGAGGCCG ACGCCTTCAT CAAAGCCTGC CGCGACACTT ATGGGCTGAA CGTCTCCGGG CTGATGTGCA TTCCGCCGGT CGACCAGGCG CCGGCGCCGC ATTTCGCGCT GACCGCGAAG ATCGCGGCGC GCAACGGCTT GCAGAAACTG TCGATGGGGA TGAGCGCCGA TTTCGCCGTC GCCATCCAGT TCGGCGCCAC CCATGTCCGG GTCGGCTCGG CGATCTTCGG GCACAGGTGA
|
Protein sequence | MSEAAGLAEV ERQIARACAD AGRERAAVTL IAVSKTFEAD GITPVLEAGQ RVFGENRVQE AKGKWPALTA AYPGVALHLI GPLQSNKAKE AVALFDAIHS VDRPSLCQAL AKEIAAQGRA VELFVQLNTG EEPQKAGVVP AEADAFIKAC RDTYGLNVSG LMCIPPVDQA PAPHFALTAK IAARNGLQKL SMGMSADFAV AIQFGATHVR VGSAIFGHR
|
| |