| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0221 |
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| Symbol | |
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| ID | 3971170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 238910 |
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| End bp | 240454 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923334 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_530115 |
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| Protein GI | 90421745 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.115082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0089568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTCGACA ATCTGTCGGA AAAGCTTGGT GGCATTCTCA ATCGGCTGAC CCGCCGCGGG
TCGCTGACCG AGGCCGACGT CGACGCCGCG ATGCGCGAAG TGCGCCGCGC GCTGCTCGAG
GCCGACGTCT CGCTCGACGT GGTGAAGAGC TTCACCGACA AGGTCCGCGA GCAGGCGATC
GGCGCCACCG TGGTGAAGTC GGTGACGCCC GGCCAGATGG TGGTCAAGAT CGTCCATGAC
GAGCTGGTCG CCACGCTCGG CTCCGACGCC CAGATCATCG ACCTCAACGC CGTGCCGCCG
GTGCCGATCA TGATGGTCGG TCTGCAGGGC TCCGGCAAAA CCACCACCAC CGCCAAGCTC
GCCCGCCGCC TCACCCAGCG CGACAAGCGC CGTGTGCTGA TGGCCTCGCT CGACGTCTAT
CGCCCGGCGG CGATGGAGCA GTTAGCAATC CTCGGCCGCG ATCTCGAGAT CGACACGCTG
CCGATCGTCG ACGGCCAGAA GCCGGCGCAG ATCGCGCGCC GCGCCATCGA GGCCGCCAAG
CTCGGCGGCT ACGACGTGGT GCTGCTCGAC ACCGCCGGCC GCACCACGCT CGACGACGAG
ATGATGGCGG AAGCCGCCGA GATCAAAGCC GTCGCCAGCC CGCACGAAGT GCTGCTGGTC
GCCGACTCGC TCACCGGCCA GGACGCCGTC AATCTGGCGC GCGCCTTCGA CACCCAGGTC
GGCCTCACCG GCATCGTGCT GACGCGCGTC GACGGCGACG GCCGCGGCGG CGCCGCGCTG
TCGATGCGCG CCGTCACCGG CAAGCCGATC AAGCTGATGG GCACCGGCGA AAAGACCGAC
GCGCTGGAAG ATTTTCATCC GAGCCGGATC GCCGGCCGGA TCCTCGGCAT GGGCGACGTG
GTGTCGCTGG TCGAGAAGGC CGCCTCGCAT CTCGACGCCG AGAAGGCCGC CGCCGTCGCC
GAGAAGATGC GCAAGGGGCA ATTCGACCTC TCCGACATGC GCGAACAATT GCTGCAGATG
ACCAAGATGG GCGGCATCGG CGGGCTGATG GGGCTGATGC CCGGCATCGC CAAGATGAAG
AGCCAGATCG CCGCCTCGCG GATCGACGAC AAGGTGCTGA GCCGGCAGAT CGCGATCATC
GATTCGATGA CCCGGCAGGA GCGCAAGAAC CCCGACATCC TCAAGGCCAG CCGCAAGAAG
CGGATCGCCG CGGGCGCCGG GCTGAAGGTC GAAGAGGTCA ACAAGCTGCT GAAAATGCAC
CGCAACATGG CCGACATGAT GAAGGCCGTG GGACGCGGCA AGGGCGGCCC GATGGCCGGT
CTCGCGCAGG CCATGGGGTT CGGCGGCGGC ATGCCCTCGC CGGAACAGAT CAAGGCGATG
CAGGAGCAGC AGGCCCAGGG CGGCGGCGGA TTGCCGGAGT TGCCGAAGGA TCTGCCGCCG
AGCCTGCGCG GCGGACTGCC GAAACTTCCC GGCCTCACGG GCTTAAGCGG CAAGCCGACG
CTGCCGGGCC TCGGCGGCTT CCCGGGCTTC GGGAAAAAGA AATGA
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| Protein sequence | MFDNLSEKLG GILNRLTRRG SLTEADVDAA MREVRRALLE ADVSLDVVKS FTDKVREQAI
GATVVKSVTP GQMVVKIVHD ELVATLGSDA QIIDLNAVPP VPIMMVGLQG SGKTTTTAKL
ARRLTQRDKR RVLMASLDVY RPAAMEQLAI LGRDLEIDTL PIVDGQKPAQ IARRAIEAAK
LGGYDVVLLD TAGRTTLDDE MMAEAAEIKA VASPHEVLLV ADSLTGQDAV NLARAFDTQV
GLTGIVLTRV DGDGRGGAAL SMRAVTGKPI KLMGTGEKTD ALEDFHPSRI AGRILGMGDV
VSLVEKAASH LDAEKAAAVA EKMRKGQFDL SDMREQLLQM TKMGGIGGLM GLMPGIAKMK
SQIAASRIDD KVLSRQIAII DSMTRQERKN PDILKASRKK RIAAGAGLKV EEVNKLLKMH
RNMADMMKAV GRGKGGPMAG LAQAMGFGGG MPSPEQIKAM QEQQAQGGGG LPELPKDLPP
SLRGGLPKLP GLTGLSGKPT LPGLGGFPGF GKKK
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