Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0204 |
Symbol | |
ID | 3971192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 222956 |
End bp | 225676 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637923317 |
Product | aconitate hydratase |
Protein accession | YP_530098 |
Protein GI | 90421728 |
COG category | [C] Energy production and conversion |
COG ID | [COG1048] Aconitase A |
TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0875867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC TCGACAGCTT CAAGTGCCGA AAGACCCTCA AAGTCGGCGC TAAGACCTAC GTCTATTACA GCCTGCCCAC CGCCGAGAAG AACGGTCTGA AAGGCATTTC CCGCCTGCCC TATTCGATGA AGGTGCTGCT GGAAAACCTA TTGCGCAACG AAGACGACCG CACCGTCAAG AAGGCCGACA TCGTCGCGGT GGCGAAATGG CTGAAGAAGC GCAAGCTCGA GCATGAAGTC GCGTTCCGCC CGGCCCGGGT GTTGATGCAG GACTTCACCG GCGTGCCGGC GGTGGTCGAT CTGGCGGCGA TGCGCAACGC CATGCAGGCG CTCGGCGGCT CGCCGGAAAA GATCAACCCG CTGGTGCCGG TCGATCTCGT CATCGATCAC TCGGTGATCG TGAACTTCTT CGGTGACAAC AAGGCGTTCG GCAAGAACGT GGTCGAGGAA TACAAGCAGA ACCAGGAGCG CTACGAGTTC CTGAAATGGG GCCAGAAGGC GTTTTCGAAC TTTAGCGTGG TGCCGCCCGG CACCGGCATC TGCCACCAGG TCAATCTGGA ATACCTCGCG CAGACGGTGT GGACCCGCAA GGAGAAGCTC ACCATCGGCA AGAAGAAGGG CACCTTCGAG GTGGCTTATC CCGACACATT GGTCGGCACC GATTCGCACA CCACCATGGT CAACGGCCTC GCCGTGCTCG GCTGGGGCGT CGGCGGCATC GAGGCGGAAG CCGCGATGCT CGGCCAGCCT TTGTCGATGC TGCTGCCCGA AGTGGTCGGC TTCAAATTGA AGGGCGCGCT GAAGGAAGGC GTCACCGCCA CCGATCTGGT GCTGACCGTG ACGCAGATGC TGCGCAAGCA GGGCGTGGTC GGCAAATTCG TCGAATTCTT CGGCCCCGGG CTCGACCATC TGTCGGTCGC CGACAAGGCC ACCATCAGCA ACATGGCGCC GGAATACGGC GCCACCTGCG GCTTCTTCCC GGTCGATGCC GAAACCATCG ATTTCCTCAA GACCTCGGGC CGCAAGGCCG ACCGGGTCGC GCTGGTGGCG AAATACGCCA AGGCGCAGGG CCTGTTCCGC ACCAGCGTCT CGCCGGACCC GGTGTTCACC GAGAAGCTGA TTCTGGATCT CGGCAAGGTC GAGCCGTCGA TGGCCGGGCC GAAGCGTCCC GAAGGCCGCA TCGCGCTACC GGCGGTGGCC GAGGGTTTTG CCGCGGCACT CGCCGGCGAA TACAAGAAGG CCGCCGATCC CGCCGCGCGC TTCCCGGTGG AGGGTCGCAA TTTCGACCTC GGCCATGGCG ACGTGGTGAT CGCCGCGATC ACCTCCTGCA CCAACACCTC CAATCCGAGC GTGCTGATCG GCGCCGGGCT GCTGGCCCGC AAGGCCGCAG CACTCGGCCT CAAGGCCAAG CCGTGGGTCA AAACCTCGCT GGCGCCGGGC TCGCAGGTCG TTGCCGAATA TCTCGCCAAT TCCGGGCTGC AGCTCGACCT CGACAAGGTC GGCTTCAATC TGGTCGGCTT CGGCTGCACC ACCTGCATCG GCAATTCCGG GCCGCTGCCG GAGGAGATCT CGAAGTCGAT CAACGACAAC GGCATCATCG GCGCTGCGGT GTTGTCGGGC AACCGCAACT TCGAAGGCCG GGTGTCGCCG GACGTGCAGG CCAACTACTT GGCCTCGCCG CCTTTGGTCG TTGCCTATGC GCTGGCCGGC ACCGTGACCA AGAACCTCAA TGTCGAGCCG ATCGGCGAAG GCAAGGACGG CAAGCCGGTG TACCTGAAGG ACATCTGGCC GACCACCAAG GAGATCAACG CCTTCGTCAA GAAGTACGTC ACCGCGGCGA TCTTCAAGAA GAAATACGCC GACGTGTTCA AGGGCGACAC CAACTGGCGC AAGATCAAGA CCGTCGACTC TGAGACCTAC AAGTGGAACA TGAGCTCCAC CTATGTGCAG AACCCGCCCT ACTTCGAAGG CATGAAGATG CAGCCGGAGC CGATCGTCGA CGTGGTCGAC GCGCGGATTC TCGCGGTGTT CGGCGACAAG ATCACCACCG ACCACATCTC GCCCGCGGGC TCGATCAAGC TGACCTCGCC GGCCGGCAAG TATCTGTCCG ATCACCAGGT GCGCCCGGCT GATTTCAATC AGTACGGCAC AAGGCGCGGC AATCACGAAA TCATGATGCG CGGCACCTTT GCCAACATCC GCATCAAGAA CTTCATGCTG AAGGGCGCCG ACGGCAATAT CCCGGAAGGC GGATTGACCA AGCATTGGCC GGACGGCGAG CAGATGTCGA TCTTCGACGC CGCGATGAAG TATCAGGCCG AGCAGGTGCC GCTGGTGGTG TTCGCCGGCG CCGAATACGG CAACGGCTCG TCGCGCGACT GGGCCGCCAA GGGAACGCGG CTGTTGGGCG TGCGCGCGGT GATCTGCCAG AGCTTCGAGC GCATCCATCG CTCCAACCTG GTCGGCATGG GCGTGTTGCC GTTGACGTTT GCGGAAGGCG ATTCTTGGGC CTCGCTCGGC ATCAAGGGCG ACGAGAAAGT GTCGATCCGC GGACTGCAGG GCGATCTCAA GCCGCGGCAG CAATTGACCG CGGAAATCAC CTCCAGCGAC GGCAAGAAAC GCGACGTCTC GTTGCTGTGC CGCATCGATA CGCTCGACGA GCTGGAATAC TACCGCAACG GCGGCATCCT GCATTACGTG CTGCGCAGGC TTGCTGCTTA A
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Protein sequence | MTSLDSFKCR KTLKVGAKTY VYYSLPTAEK NGLKGISRLP YSMKVLLENL LRNEDDRTVK KADIVAVAKW LKKRKLEHEV AFRPARVLMQ DFTGVPAVVD LAAMRNAMQA LGGSPEKINP LVPVDLVIDH SVIVNFFGDN KAFGKNVVEE YKQNQERYEF LKWGQKAFSN FSVVPPGTGI CHQVNLEYLA QTVWTRKEKL TIGKKKGTFE VAYPDTLVGT DSHTTMVNGL AVLGWGVGGI EAEAAMLGQP LSMLLPEVVG FKLKGALKEG VTATDLVLTV TQMLRKQGVV GKFVEFFGPG LDHLSVADKA TISNMAPEYG ATCGFFPVDA ETIDFLKTSG RKADRVALVA KYAKAQGLFR TSVSPDPVFT EKLILDLGKV EPSMAGPKRP EGRIALPAVA EGFAAALAGE YKKAADPAAR FPVEGRNFDL GHGDVVIAAI TSCTNTSNPS VLIGAGLLAR KAAALGLKAK PWVKTSLAPG SQVVAEYLAN SGLQLDLDKV GFNLVGFGCT TCIGNSGPLP EEISKSINDN GIIGAAVLSG NRNFEGRVSP DVQANYLASP PLVVAYALAG TVTKNLNVEP IGEGKDGKPV YLKDIWPTTK EINAFVKKYV TAAIFKKKYA DVFKGDTNWR KIKTVDSETY KWNMSSTYVQ NPPYFEGMKM QPEPIVDVVD ARILAVFGDK ITTDHISPAG SIKLTSPAGK YLSDHQVRPA DFNQYGTRRG NHEIMMRGTF ANIRIKNFML KGADGNIPEG GLTKHWPDGE QMSIFDAAMK YQAEQVPLVV FAGAEYGNGS SRDWAAKGTR LLGVRAVICQ SFERIHRSNL VGMGVLPLTF AEGDSWASLG IKGDEKVSIR GLQGDLKPRQ QLTAEITSSD GKKRDVSLLC RIDTLDELEY YRNGGILHYV LRRLAA
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