Gene RPC_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0203 
Symbol 
ID3971191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp222054 
End bp222809 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID637923316 
Producthypothetical protein 
Protein accessionYP_530097 
Protein GI90421727 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.250925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGT GGAGCGGACT TCTCAACGGA CCGGGCGCGC TCGCCGCCTG CGCGTTGCTG 
GCAACGATCT GTCCCGCCGT GGCGCAGCCG CGCGCCGTGG TCGAATTGTT CACCTCGCAG
GGCTGCTCGT CGTGCCCGGC CGCCGACAAG ATCATCGGCG ACCTCGCCAG TGACCCCTCG
GTGATCGCGC TCAGCATGCC GATCGACTAT TGGGACTATC TCGGCTGGAA GGACACGCTG
GCGGACTCCC GCTTCAGCGC CCGGCAGAAG GCCTATTCGG CGCGGCGCGG CGATCGCGAC
GTCTACACCC CGCAGATGAT CGTCAACGGC GCGATGCAGG TGGTCGGCAA CGACCGCGCG
CGGATCGACG GCGCGATCTC CGACACCGAG AAGACCGCGG GCGTGATGTC GGTGCCGGTC
ACCGTGACGC TCGACGGCAA GCAGCTCAAG GTCGCGGTCG CGGCGGGCGC CGCCGATGTG
GCGCCGAGCC AGGCCGAGGT GTGGATCTGC TCGATCTCCA AGGCGGTGCC GATCGCCATC
ACCCGCGGGG AAAACCGCGG CCGCGAGGTG ACCTATCACA ACGTGGTGCG GACCTGGCTG
AAGGTCGGCG ATTGGACCGG CCAAGCCGAT AGCTGGACGG TGCCGATCGA GAACGTCGCC
GGCGCCGGCG TCGACGCCGC GGTGGTCTAT GTCCAGAGCG GCAGCCGCGA GCAGCCCGGC
CCGATGCTCG GCGCGGCGTT GACCGCGCTC GACTGA
 
Protein sequence
MMAWSGLLNG PGALAACALL ATICPAVAQP RAVVELFTSQ GCSSCPAADK IIGDLASDPS 
VIALSMPIDY WDYLGWKDTL ADSRFSARQK AYSARRGDRD VYTPQMIVNG AMQVVGNDRA
RIDGAISDTE KTAGVMSVPV TVTLDGKQLK VAVAAGAADV APSQAEVWIC SISKAVPIAI
TRGENRGREV TYHNVVRTWL KVGDWTGQAD SWTVPIENVA GAGVDAAVVY VQSGSREQPG
PMLGAALTAL D