| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0190 |
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| Symbol | |
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| ID | 3971178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 204840 |
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| End bp | 206144 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923303 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_530084 |
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| Protein GI | 90421714 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA TTCGCGTTCC AACGCTCGGC GAATCGGTGA CCGAGGCGAC CATCGGCCGC
TGGTTCAAGA AGGCCGGCGA CGCCGTCGCG GTCGACGAGC CGTTGGTCGA ACTGGAAACC
GACAAGGTCA CCATCGAGGT GCCGGCGCCC TCCGCCGGAA CGCTCGGCGA GATCGTCGCC
AAGGACGGCG AGACCGTCGC GGTCGGCGCC TTGCTCGGCC AGATCACCGA CGGCGCCGCG
AAGGCCGCGC CGAAGGACGC CGCCAAGGCT TCCGGCGTCG CGCCGGAGAC CACCACCGGC
CGCCCCGACC TGAAGACCGA TGGCACCAAG CCGATCAACG CCGGCCCGGA AGAGCCGCGG
CTGCGGCCCG AGGCCAAGGC TGAGGCCAAA TCGCTGCCGG CTGACACGCC GCAGGCGCCG
TCGGTGCGCA GGCTTTCGGC CGAGAACGGC GTCGACGCCG CTACCGTGCC GGGCTCCGGC
AAGGACGGCC GCGTCACCAA GGGCGACATG CTGGCGGCGA TCGAGAAGGC GGCCTCCGCG
CCGACCCCGG TCGATCAGCC GGCCGCCGCG GTGCAGGTCC GCAGCCCGTC GCCGGCCGAC
GACGCCGCGC GCGAGGAGCG CGTGAAGATG ACGCGGCTGC GCCAGACCAT CGCGCGCAGG
CTCAAGGAAG TTCAGAACAC CGCGGCGATG CTGACGACCT TCAACGAGGT CGACATGAGC
CACATCATGG CGCTGCGCGC GCAATACAAG GAGGTGTTCG AGAAGCGCCA CCACTCCAAG
CTGGGCTTCA TGGGCTTCTT CGTCCGCGCC TGCGTGCAGG CGCTGAAGGA CATTCCGGCG
GCCAACGCCG AGATCGACGG CACCGACCTG ATCTACAAGA ACTACTACCA CATCGGCGTC
GCGGTCGGCA CCGACAAGGG CCTGGTGGTG CCGGTGGTGC GCGACTGCGA CCACAAGTCG
ATCGCGCAGA TCGAAAAGAG CATCGCCGAT TTCGGCAAGC GCGCCCGCGA CGGCCAGCTC
AAGATCGACG AGATGCAGGG CGGCACCTTC ACCATCACCA ATGGCGGCAT CTACGGCTCC
TTGATGTCGA CCCCGATCCT GAACGCGCCG CAGTCCGGCA TCCTCGGCAT GCACAAGATC
CAGGAACGCC CGGTGGCGAT CGCCGGCAAG GTCGAGATCC GGCCGATGAT GTACTTGGCG
CTCAGCTACG ACCACCGCGT GATCGACGGC AAGGACGCCG TGACCTTCCT GGTGCGGGTC
AAGGAAAGCC TGGAGGATCC GACGCGGCTG GTGCTGGATC TGTAA
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| Protein sequence | MTEIRVPTLG ESVTEATIGR WFKKAGDAVA VDEPLVELET DKVTIEVPAP SAGTLGEIVA
KDGETVAVGA LLGQITDGAA KAAPKDAAKA SGVAPETTTG RPDLKTDGTK PINAGPEEPR
LRPEAKAEAK SLPADTPQAP SVRRLSAENG VDAATVPGSG KDGRVTKGDM LAAIEKAASA
PTPVDQPAAA VQVRSPSPAD DAAREERVKM TRLRQTIARR LKEVQNTAAM LTTFNEVDMS
HIMALRAQYK EVFEKRHHSK LGFMGFFVRA CVQALKDIPA ANAEIDGTDL IYKNYYHIGV
AVGTDKGLVV PVVRDCDHKS IAQIEKSIAD FGKRARDGQL KIDEMQGGTF TITNGGIYGS
LMSTPILNAP QSGILGMHKI QERPVAIAGK VEIRPMMYLA LSYDHRVIDG KDAVTFLVRV
KESLEDPTRL VLDL
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