| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0047 |
|---|
| Symbol | |
|---|
| ID | 3971434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 54230 |
|---|
| End bp | 54976 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637923161 |
|---|
| Product | uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_529945 |
|---|
| Protein GI | 90421575 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCTGC TCGTCACCCG CCCGCAACCC GACAACGAGA CCACCGCTGT GGCGTTGCGG
ACCAAGGGAT ACGAGGTGCT GCTGGCGCCG ATGCTGCGGT TCGAAGCGGT CGCGGTGAAG
GACGATCCCG AGGCGCGCTA CGGCGCGGTG ATCGTCACCA GCGCCAATGC GCTGCGCGCC
GTCGCCGGCC AGACCGGCAT TGCCCGGCTG CTCGATCTGC CGTTGTTCGC GGTTGGCGCG
CGCACCGCGC AAAGCGCGCG CGATGCAGGA TTTCGCAACG TCATCGTCGC CGATGGCGAC
GCCAGCGCGC TGCGCGACAA GATCGTCGCC GCCGCCCGCG CCAAACAGCT GCAAAAGGCC
GACACCCTAT TGTATCTGTC CGGAGCCGAG GTCGCCCGCG ATCTCGCAGG TGAGCTGCGC
GCGCTGGGGT TCAATATCGC CACACAGACC GCTTATAAGA TGATACCGGT ACGCGATCTG
CCCGACGAGG TCTGCGACGC CTTTGCCGCA AATCGCATCG AGGCCGTGCT GCATTATTCG
GGACGCAGTG CGCGCTCGTT TCTGGAAGCG GCGCGGAGCG CGGGGATCGA GATTTCGGCG
CTGGCGGTGC CGCAATGCTG CCTGTCGGCG GCGGTCGCCG GGGTGGTGCG CGAAGCCGGG
GCGACCCGGG TGATGGAGGC GCGCAGGCCG GATGAGGCCG CGTTGTTCGA CGTGCTAGAT
CGTGCGCTGA GCCCGCTGGC ACGCTAA
|
|---|
| Protein sequence | MALLVTRPQP DNETTAVALR TKGYEVLLAP MLRFEAVAVK DDPEARYGAV IVTSANALRA
VAGQTGIARL LDLPLFAVGA RTAQSARDAG FRNVIVADGD ASALRDKIVA AARAKQLQKA
DTLLYLSGAE VARDLAGELR ALGFNIATQT AYKMIPVRDL PDEVCDAFAA NRIEAVLHYS
GRSARSFLEA ARSAGIEISA LAVPQCCLSA AVAGVVREAG ATRVMEARRP DEAALFDVLD
RALSPLAR
|
|---|
| |