Gene RPC_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0007 
Symbol 
ID3969432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp9960 
End bp10469 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID637923121 
ProductAsnC family transcriptional regulator 
Protein accessionYP_529905 
Protein GI90421535 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC TCGCGCTGCC GCCGGTTGAA TCGCATCGCC GGATCGATGC CATTGACCGC 
AAGATTCTGA CCGTGTTGCA GCAGGATGCG TCGCTCTCGG TGGCCGAGAT CGGTGACCGC
GTCGGGCTTT CGTCGACGCC GTGCTGGAAG CGGATCCAGC GGCTGGAGAG CGACGGCGTC
ATCATGCGAC GGGTGGCGTT GGTCGATCAG AACAAGATCG GGCTTGGGCT GTCGGTGTTC
GTGTCGATCG AAAGCGGCGA TCACTCCGAC GCCTGGCTGA AGAAATTCGC CGACGCGGTC
AGCGCGATGC CGGAGGTGAT CGAGTTTTAC CGGATGGCCG GCGACGTCGA CTACATGCTG
CGCGTCGTGG TCGCCGATAT GCGCGCCTAC GACGTGTTCT ACAAGAAGCT GATCAGCGCG
GTGGCGCTGA AGAACGTCAC CTCGCGCTTT GCGATGGAGA AGATCAAGTC GGTCACCGCG
CTACCGGTGC CGGCGCTGGA AGTGGCGTAG
 
Protein sequence
MAELALPPVE SHRRIDAIDR KILTVLQQDA SLSVAEIGDR VGLSSTPCWK RIQRLESDGV 
IMRRVALVDQ NKIGLGLSVF VSIESGDHSD AWLKKFADAV SAMPEVIEFY RMAGDVDYML
RVVVADMRAY DVFYKKLISA VALKNVTSRF AMEKIKSVTA LPVPALEVA