Gene RPB_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4612 
Symbol 
ID3912429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5209976 
End bp5210674 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID637886516 
Producthypothetical protein 
Protein accessionYP_488206 
Protein GI86751710 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGT TTGCTGATCC GCTTCCGATC AACGACTCCG CAGTATCGAT TGCCGGCGCT 
ACGTTCGCCG CCGATCTGTC CGGCGTGCTG TATTGGGAGC GCGAGCGGCT GCTGGTCGTC
TCCGACCTGC ATCTCGAAAA AGGCTCGAGC TATGCGATGC GCGGCGTGCT GCTGCCGCCT
TACGATACCG TCGCCACGCT GGGCCGGCTC GGCGCCGTGG TCACGCGTTT CAATCCGCGC
ACGGTGATCG CGCTCGGCGA CAGTTTTCAC GATCGCGACG CGCATGGCCG GCTGTCAGGC
GGCAATCGCG ATATCCTGAT GGCCCTGCAG GCGGGCCGTG ACTGGATCTG GATCGCCGGC
AACCATGATC CGGCGCTGCC CGCCGATCTC GGCGGTTGCG TCGCCGACGA GGTCGCGCTC
GGCGGCGTGA TCTTCCGCCA CGAGCCGACC GGGGCGCACG GCGAAATCGC CGGCCATCTG
CATCCCAAGG CGCGGGTCAG CCGCCGCGGC CGCAGCGTCG AGCGGCGTTG CTTCGCCGGC
GACGGCAGCC GCATGGTGAT GCCGGCGTTC GGCGCCTATG CGGGCGGGCT CAACATCCGC
GATGCAGCCT TCGCCAGGCT GTTCGGCTCG GCCGTGGTCA TCGCCCATGT CCTCGGCGAC
CACCGTCTCC ACGCCATCGC AGCGTCGCGC TGCTGCTGA
 
Protein sequence
MTMFADPLPI NDSAVSIAGA TFAADLSGVL YWERERLLVV SDLHLEKGSS YAMRGVLLPP 
YDTVATLGRL GAVVTRFNPR TVIALGDSFH DRDAHGRLSG GNRDILMALQ AGRDWIWIAG
NHDPALPADL GGCVADEVAL GGVIFRHEPT GAHGEIAGHL HPKARVSRRG RSVERRCFAG
DGSRMVMPAF GAYAGGLNIR DAAFARLFGS AVVIAHVLGD HRLHAIAASR CC