Gene RPB_4571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4571 
Symbol 
ID3912388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5169539 
End bp5170285 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID637886475 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_488165 
Protein GI86751669 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCG ATCCAATTCA TCAGTTCCAG ATCACCAAGC TGTTTTCCCT TGGTCACATT 
GGCGGACAGG AAATCGCGTT CACCAATTCG TCGGCCTACA TGTTCGCCGC GGTGGCGATC
ATCGCGGTGA TGATGCTGGC GCCGGGCCGC CAGCTGGTGC CGGGCCGGTT CCAGTCGGTC
GCCGAGCTGT CTTACGAATT CGTCGCCAAC ATGATCCGAT CGACCGCCGG CAAGGAAGGC
CTGAAGTTCT TCCCGCTGGT GTTCTCGCTG TTCATGTTCA TCGCGGTCTC AAATCTGGTC
GGCATCATCC CCTACACCTT CACGGTGTCG AGCCACCTGA TCGTCACCGT GACGCTGGCG
ATGCTGGTGT TCGTCACCGT GCTGGTCTAC GGCCTCGCCA AGAACGGCCT GAAGTTCTTC
AAGCTGTTCG TGCCGTCCGG CGTGCCGATC TACATCCTGC CGCTGGTGGT GTTCATCGAG
GTCATCTCGT TCTTCCTCAA GCCGGTGTCG CACTCCGTTC GTCTGTTCGC CAACATGCTG
GCGGGCCACA TCGCGCTGAA AGTGTTCGCG AGCTTCATCG CCATGCTCGG CGCGCTCGGC
GTCGTCGGCT GGGTCGGCGC GGTGCTGCCG CTCGGCCTGA CCATCGCCTT GACCGCCCTC
GAACTGCTGG TCGCGTTCCT GCAGGCCTAC GTGTTCGCCA TCCTGACTTG CATCTATCTC
AACGATGCGA TTCACCCGGG CCACTGA
 
Protein sequence
MAADPIHQFQ ITKLFSLGHI GGQEIAFTNS SAYMFAAVAI IAVMMLAPGR QLVPGRFQSV 
AELSYEFVAN MIRSTAGKEG LKFFPLVFSL FMFIAVSNLV GIIPYTFTVS SHLIVTVTLA
MLVFVTVLVY GLAKNGLKFF KLFVPSGVPI YILPLVVFIE VISFFLKPVS HSVRLFANML
AGHIALKVFA SFIAMLGALG VVGWVGAVLP LGLTIALTAL ELLVAFLQAY VFAILTCIYL
NDAIHPGH