| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4563 |
|---|
| Symbol | |
|---|
| ID | 3912380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 5158964 |
|---|
| End bp | 5160193 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637886467 |
|---|
| Product | 5-aminolevulinate synthase |
|---|
| Protein accession | YP_488157 |
|---|
| Protein GI | 86751661 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTACA GCAAATTCTT CGAGGACGCT CTCACCCGCC TGCACGACGA GCGCCGCTAT
CGCGTCTTCG CCGATCTCGA GCGCATCGCC GGCAGGTTTC CGCAGGCCGT GTGGCATTCG
CCGACGGGTC CTCGCGATGT CGTGATCTGG TGCTCGAACG ATTACCTCGG CATGGGTCAG
CACCCGAAAG TGATTGGCGC GATGGTCGAG ACCACGACCC GGATCGGCAC CGGCGCCGGC
GGCACCCGCA ACATCGCCGG CACGCACCAT CCGCTGGTGC AGCTCGAGCG CGAAATCGCC
GACCTGCACG GCAAGGAAGC GGCCTTGCTG TTCACCTCGG GCTACGTGTC GAACCAGACC
GGCCTGTCGA CGCTCGGCAA GCTGATCCCG AACTGCCTGA TCCTGTCGGA CGCGCTGAAC
CACAATTCGA TGATCGAAGG CATCCGTCAG TCGGGCTGCG AGCGCGTGGT CTGGCGCCAC
AACGACACCG CCCATCTCGA AGAGCTGCTG ATCGCCGCCG GCCCCGACCG GCCGAAGCTG
ATCGCATTCG AGAGCCTGTA TTCGATGGAC GGCGACACCG CGCCGCTGGC GAAGATCTGC
GATCTCGCCG AGAAGTACGA CGCGATGACT TATTGCGACG AAGTCCACGC CGTCGGCATG
TACGGGCCGC GCGGCGCCGG CGTCGCCGAA CGCGACGGCG TGATGGCCCG CATCGACATC
ATCGAAGCGA CGCTGGCGAA GGCGTTCGGC TGCCTCGGCG GCTACATCGC CGGCAAGGCC
GACGTGATCG ACGCGGTGCG CTCCTATGCG CCGGGCTTCA TCTTCACCAC CGCGCTGCCG
CCGCCGATCT GCGCCGCCGC GACCGCCGCC ATCCGCCACC TCAAGGCGTC GACCTGGGAA
CGCGAGCGCC ACCAGGACCG CGCCGCGCGG GTCAAGGCCG TGCTGAACAA TGCCGGCATC
CCGGTGATGC CGACCGACAC CCACATCGTG CCGGTGTTCG TCGGCGATGC CGAAAAATGC
AAGATGGCGT CCGATCTGCT GCTCGAGCAG CACGGTATCT ACATCCAGCC GATCAACTAC
CCGACCGTCG CCCGCGGCCT CGAGCGGCTG CGGATCACGC CGTCGCCGTA TCACGACGAC
AAGCTGATCG ACGCGCTGGC CGAGGCGCTG GTCCAGGTCT GGGGCCAGCT CGGCCTGCCG
CTCGGCGCCA AGGCGATCGC GGCCGAATAG
|
|---|
| Protein sequence | MQYSKFFEDA LTRLHDERRY RVFADLERIA GRFPQAVWHS PTGPRDVVIW CSNDYLGMGQ
HPKVIGAMVE TTTRIGTGAG GTRNIAGTHH PLVQLEREIA DLHGKEAALL FTSGYVSNQT
GLSTLGKLIP NCLILSDALN HNSMIEGIRQ SGCERVVWRH NDTAHLEELL IAAGPDRPKL
IAFESLYSMD GDTAPLAKIC DLAEKYDAMT YCDEVHAVGM YGPRGAGVAE RDGVMARIDI
IEATLAKAFG CLGGYIAGKA DVIDAVRSYA PGFIFTTALP PPICAAATAA IRHLKASTWE
RERHQDRAAR VKAVLNNAGI PVMPTDTHIV PVFVGDAEKC KMASDLLLEQ HGIYIQPINY
PTVARGLERL RITPSPYHDD KLIDALAEAL VQVWGQLGLP LGAKAIAAE
|
|---|
| |