| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4536 |
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| Symbol | |
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| ID | 3912353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 5129267 |
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| End bp | 5130778 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637886440 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_488130 |
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| Protein GI | 86751634 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.221207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCA GTGGGCTTTT CGAACGGATC AGGCAGGAAA TCGGGCGGCG GCGGCGGATG
TCGCCACGCC TGCTGATCTT CTCGTCGGTC ATCACGGTGC TTGGATTTTC GGCGGTCTGC
GGCAGCATCA TGCTGGAGAT GCGGCGCAAC GCCCAGGAGC TGGCGCGTCA GACTCAGGAA
AATCTCGCCT CCACGATCAG CGCCGACATC AATCGCACCG TCGAGCTCTA CGACCTCTCG
CTGCGTTCCG CGGTCAACAG CCTGGCGCTA CCGCAGCTTT CGCAGGTCGA CGACACCATC
CGCCGCCTGA TCCTGTTCGA TCACGCGGCG ACGGCGCAGC ATTTCGGTGC GATCCAGGTT
TTCGACGCGC AGGGAAACCT GGCGATCGAT TCCGCGTCGC GGACCCCGGA CAAGATCAAT
CGCGCCGCAG AGCCGTATTT CACCGTGCAG CGGGATCAGC CGGATCACGG CCTGTATATC
AGCGGGCCGA TGCAGCATCG TGGCGCCTAT TCGATCGTGC TGAGCCGGCG CGTCTCTGGG
CCGGACGGGC AATTTCTCGG CATCGTCGCG GGCTCGATCC GCTTCAGCTA TTTCCAGGAG
CTGTTCAGCC GGCTGCGGCT CGCACCGCAC GACGTGATCG CGGTGATCGT GTCGGACGGC
AGCCTGATCA TGCGAACACC GTTCAGTCCA GAACTGCTCG GCTCCAATGT GATGGCGAAC
ATCGGCATGA GCAACATCCT GAGCCAGCGG CGCGGCTGGT TCAGTGGGCA CGGCAAGCTC
GACAAGATTT CCCGGATCTA CGTGTGGGCG GACAGCACCC GGCCGCTCGT GGTGCTGGTC
GGCAAATCCT GGGACGACGT CTTCAAGATG TGGCGCGAGG AGGCGATCCG GATCGGCGCC
ATCCTGCTCG GGCTCGCGAT CATTGTCGCC GGCTTCACCG TCTTCTTCAT CCGCGAGATC
GACCGTCGCG CCGCGGCCGA ACGGCGGCTG GAGGAACTGG CCACCACCGA CGCGCTGACC
GGGCTGACCA ACCGTCGCAA GTTCGACGTC ACGATCGATC GCGAATGGCG CCGCGCGCTG
CGGTCGCAGA CGCCGATCGC CCTGATGATC ATCGACGCCG ATCATTTCAA GGCGTTCAAC
GACAGCTATG GTCACCAGGC CGGCGACCAG GTGCTGGTCG GCATCGCGCT GTGCATCGGC
GACTCCGTGC AGCGCGCCGG CGATTGCGCG GCGCGGTTCG GCGGCGAGGA ATTCGCCGTG
CTGCTGCCGG GGATGAATGC AACGGCGGCG CTGGAGATGG CGGAAACGAT CCGGCAGAAG
GTCGAACTCT GGTCGGATGG TCAGGCTGGC GTCACCGTCA GTGTCGGCGT CGCCAGCATG
ATGCCCGGTC CGGCGCAGCA CTGGTCGGTG CTGTTCGAGG CCGCCGACAA GGCGCTCTAC
GCGGCCAAGG ATCTCGGCCG AAACCGCTCC GTGGTCGCGG CGAACCGCAG CGACCTCACG
CTGGTCGCCT GA
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| Protein sequence | MRGSGLFERI RQEIGRRRRM SPRLLIFSSV ITVLGFSAVC GSIMLEMRRN AQELARQTQE
NLASTISADI NRTVELYDLS LRSAVNSLAL PQLSQVDDTI RRLILFDHAA TAQHFGAIQV
FDAQGNLAID SASRTPDKIN RAAEPYFTVQ RDQPDHGLYI SGPMQHRGAY SIVLSRRVSG
PDGQFLGIVA GSIRFSYFQE LFSRLRLAPH DVIAVIVSDG SLIMRTPFSP ELLGSNVMAN
IGMSNILSQR RGWFSGHGKL DKISRIYVWA DSTRPLVVLV GKSWDDVFKM WREEAIRIGA
ILLGLAIIVA GFTVFFIREI DRRAAAERRL EELATTDALT GLTNRRKFDV TIDREWRRAL
RSQTPIALMI IDADHFKAFN DSYGHQAGDQ VLVGIALCIG DSVQRAGDCA ARFGGEEFAV
LLPGMNATAA LEMAETIRQK VELWSDGQAG VTVSVGVASM MPGPAQHWSV LFEAADKALY
AAKDLGRNRS VVAANRSDLT LVA
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