Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4530 |
Symbol | gltD |
ID | 3912347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 5118767 |
End bp | 5120221 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637886434 |
Product | glutamate synthase subunit beta |
Protein accession | YP_488124 |
Protein GI | 86751628 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TCACGGGATT TCTGGAAATC GAACGGCACG ATCGGGTCTA TGCGCCGGTC GCCGAGCGGG TGAAGAACTA CAACGAATTC GTCGTCCCGC TCAGCGACAA GGACCTCGGC GACCAGGCCG CGCGCTGCAT GAATTGCGGC ATTCCGTATT GCCACGGCAC CGGCTCGGCG CAGCCGGGCG CGCCGGGCTG CCCGGTCAAC AACCAGATCC CCGACTGGAA CGATCTGGTG TACCAGGGCA ATTGGCAGGA GGCCTCGCGC AACCTGCACT CCACCAACAA CTTCCCGGAA TTCACCGGCC GCATCTGCCC GGCGCCGTGC GAAGCCTCGT GCACGCTGAA CATCGACGAC AACCCGGTCA CCATCAAGAC CATCGAATGC GCCATCGTCG ACCGCGCCTG GGAGAACGGC TGGCTCGTGC CCGAGCTCGC CTCGGTCAAG ACCGGCCAGA GCGTCGCGGT GATCGGCGCC GGCCCGGCGG GCCTCGCCTG CGCCCAGCAG TTGGCGCGCG CCGGCCATGA CGTCCACGTC TATGAGAAGC TCGCCAAGGC CGGCGGCCTG CTGCGCTACG GCATTCCCGA CTTCAAGATG GAGAAGCATC TGATCGACCG CCGCGTCGCG CAGATGGAAG CCGAAGGCGT CACCTTCCAC TACAATGCAC CGGTCGGCGG CAATGCGGCC GGCGCGGTCG ATCCGGCCGA GCTGCTGAAG CAGTACGACG CCGTGGCCTT GACCGGCGGC GCGGAATATC CGCGCGACCT GCCGATCCCG GGCCGCGAGC TCTCCGGCAT CCATTTCGCG ATGGACTTCC TGACCCAGCA GAACCGCCGC GTCTCCGGCG AAGCGGTGAA CGGCGCCGAC ATTCTGGCGA CCGGCAAGCA CGTCGTGGTG ATCGGCGGCG GCGACACCGG CTCGGACTGC ATCGGCACCT CGATCCGTCA GGGCGCCACC TCGGTGACCC AGATCGAGAT CATGGCGGCG CCGCCGGAGA AGGAAGACAA GGGCCTGACC TGGCCGAACT GGCCGATGAA GATGCGCACC TCGTCGAGCC AGGCCGAAGG CGCGGTCCGC GAATTCGCGG TGCTGACGCA GAGCTTCACG GGCGAGAACG GCGCGGTGAA GCAGCTCGAT TGCGTCCGCG TCGACGCCAA ATTCCAGCCG ATCCCCGGCA CCGAATTCAC GCTGCAGGCC GATCTGGTGC TGCTGGCGAT GGGCTTCGTC TCGCCGGTCA AGCAAGGCCT GCTCGAAAAA CTCGGCGTCG CCCTCGACCC GCGCGGCAAT GTCAGCGCCG ACCTGTCGCA CTTCACCACC TCGGTCGACA AAGTCTTCGC CGCCGGCGAC ATGCGCCGCG GCCAGTCGCT GGTCGTCTGG GCGATCCGCG AAGGCCGCCT GTGCGCCCGG GCGATCGATC AGTTCCTGAT GGGAAGCACG ACGCTGCCGA AGTAA
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Protein sequence | MGKITGFLEI ERHDRVYAPV AERVKNYNEF VVPLSDKDLG DQAARCMNCG IPYCHGTGSA QPGAPGCPVN NQIPDWNDLV YQGNWQEASR NLHSTNNFPE FTGRICPAPC EASCTLNIDD NPVTIKTIEC AIVDRAWENG WLVPELASVK TGQSVAVIGA GPAGLACAQQ LARAGHDVHV YEKLAKAGGL LRYGIPDFKM EKHLIDRRVA QMEAEGVTFH YNAPVGGNAA GAVDPAELLK QYDAVALTGG AEYPRDLPIP GRELSGIHFA MDFLTQQNRR VSGEAVNGAD ILATGKHVVV IGGGDTGSDC IGTSIRQGAT SVTQIEIMAA PPEKEDKGLT WPNWPMKMRT SSSQAEGAVR EFAVLTQSFT GENGAVKQLD CVRVDAKFQP IPGTEFTLQA DLVLLAMGFV SPVKQGLLEK LGVALDPRGN VSADLSHFTT SVDKVFAAGD MRRGQSLVVW AIREGRLCAR AIDQFLMGST TLPK
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