Gene RPB_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4450 
Symbol 
ID3912265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp5034829 
End bp5037105 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content66% 
IMG OID637886352 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_488044 
Protein GI86751548 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGG CTGCCGGTGA CGTCGACCTG ACGAACTGTG ACCGCGAGCC GATACACATT 
CCCGGGTCCA TCCAGCCGCA TGGACTATTG ATCGCGTTCA ACGATGATCT GCGGGCGGTT
GCCGTCAGTT CCAACATCGC GACCTTCGCC GACCTCGGCC CGGACGATCT GCTCGGCAGA
TCGCTCGCCG AGGCACTCGA CGCCGACAGC CAGGCGCGGC TCCGCAGCGC CATGCGTGAG
CCGGTCGATG CCAGCGGTTC GCCGGTCGCC ATCCGGCTGC GCCGGCGCGA CGCCGAGTTC
ACCGGCCTCT GGCATCGCCA CGGCGGGTTG ACGTTTCTCG AACTCGAAGT ACCACGGCAC
GAGGCGGCGG AGTCGCACGC GTTCTTCTGC CGGACCAGCG GCGCGATCAA GCGCCTGCAG
GCGGCGCAGA GCCTGGAAGG CGCCTGCAGC GCTGCGGCGC GCGAAGTGCG CGAGATCACC
GAATTCGATC GGGTCAAGAT CTACCGCTTC GCGCCCGACT TCAGCGGCGA AGTGATCGCG
GAGGACCGTA CCGAAGGCGT CGAGTCGTTT CTCGGGCTGC ACTTTCCGCC GTCGGATATC
CCGGCGCAGG CGCGCAGGCT CTACGCCACC AATCCGATCC GGATCATTCC CGATATCGAC
TACATCCCCG TTCCGATCGT GCCCGGCCAC GATCCGTCCA CCGGGCAGGC GATCGATCTG
AGTTTTGCCG TGCTGCGGAG CGTTTCGCCG ATCCATCTCG AATATATGCG CAATATCGGC
ATGCGCGGCA CGATGTCGGT CTCGATCCTC CGCGGCGACA AGCTGTGGGG GCTGATCGCG
TGCCACAACC GGCAGCCGCG CTACGTCGGC CACGACGCTC GCCAGGCTTG CGACATGGTC
GCACAGGTGC TGGCATGGCA GGTCGGCGTG ATGGAGGAGC AGGCTGCGAC CCGCCAGACC
CTGAAGGGAA AGGCGATCCA GCGCAGCCTG ATCAGCGACA TCGAACAATT GCACGACCAT
CGCGCGGGTC TGGTGCGCAA CAGCGAAGCC CTGCTCGAAT TGATGGGGGC GTCCGGCCTG
TGCCTGTTCG GACGCGAAGG CATCACCTCG ATCGGCCGCA CGCCACCCGA AGCGGCGATC
GAGATGCTGG CCGGTCTGGT CGGGCGCAAT GACAGCGCCG AGCTGTTCGC GACCGATCAG
CTGTCCACCC TGTTTCCGGA GGCCAAAGCC TTCGCCGACG TCGCCAGCGG GGTGCTCGCC
GTTCCGCTGT CGCGCACGAC GCCGCGGCGG GTGATGCTGT GGTTTCGCCC GGAAGTGTCG
CAGACCGTCT ATTGGGCCGG CAATCCCGAC AAATCGGTCA GGGCGGAGTC CGGGCGATTG
CGGCCACGGA CATCGTTCGT CGCCTGGACC GAGGAAACCA GCGGGCGCGC GTTGCCCTGG
CAGCCGCATG AAATCGCGGC CGCGGTCGAG ATCAGGGATC TGGTCATCGA CGTGATCCTG
CGCAACACCG AGAAGCTCGA ACGCGTGAAC ACTCAGCTCG CGCGCAGCAA TGAAGAACTC
GAGGCTTTCG CCAACGTGGC CTCGCACGAC ATCAAGGAGC CTCTGCGTCA CATCGAGGCC
TTCGCCGGAC TGCTCGGCGA GTCGATCCGC GAGATGGGCG ACGAGCGCCT CGGCCTGATG
GTCAGCGGCA TCGAAAAGTC GTCGCAGCGG CTGCGCATTC TGATCAACGA CCTCGCCGAA
TTCTCGCAGC TCGGCCGCCG CTCCAAGCCG CTCGCACAGA CGTCTTTGAT GGAAGTCGCC
CAGGACGTCG CCACCGATCT GCATCAGCGG ATCGAAGAGG CGGCGGCGGT CGTGGGGATC
GAACAGCTCC CGGTCGCGCA ATGCGATCGC AACCAGATGC GGCAGGTTCT ACAGAATCTG
TTGTCGAACG CATTGAAGTA TCGGCATCCC GGCCGACCCT GCCGAATTCG CGTGTACGCC
GAGCAGCGCA GCGCGGAGGA GCCTCGCGGG GAGGTCGGCA GGGCGGCCGC CTCCACACGG
ATCTGCGTCA GCGACAACGG CATCGGCTTC GACCCGAAAT ACGCCGAGCA GATCTTCGAG
CCGTTTCAGC GTCTCCATGG CCCCGACGAC TACGAGGGCA GCGGCATCGG GCTCGCGATC
TGCCGCAAGA TCGTGCAGCG GCACGGAGGC CAGGTCGGCG TCGACACGAT CCCCGGTTCT
GGCTCCACCT TCTGGTTCAC GCTGCCGATT GCGGTCGCCC TGTCGGCCAC GCCTTGA
 
Protein sequence
MNSAAGDVDL TNCDREPIHI PGSIQPHGLL IAFNDDLRAV AVSSNIATFA DLGPDDLLGR 
SLAEALDADS QARLRSAMRE PVDASGSPVA IRLRRRDAEF TGLWHRHGGL TFLELEVPRH
EAAESHAFFC RTSGAIKRLQ AAQSLEGACS AAAREVREIT EFDRVKIYRF APDFSGEVIA
EDRTEGVESF LGLHFPPSDI PAQARRLYAT NPIRIIPDID YIPVPIVPGH DPSTGQAIDL
SFAVLRSVSP IHLEYMRNIG MRGTMSVSIL RGDKLWGLIA CHNRQPRYVG HDARQACDMV
AQVLAWQVGV MEEQAATRQT LKGKAIQRSL ISDIEQLHDH RAGLVRNSEA LLELMGASGL
CLFGREGITS IGRTPPEAAI EMLAGLVGRN DSAELFATDQ LSTLFPEAKA FADVASGVLA
VPLSRTTPRR VMLWFRPEVS QTVYWAGNPD KSVRAESGRL RPRTSFVAWT EETSGRALPW
QPHEIAAAVE IRDLVIDVIL RNTEKLERVN TQLARSNEEL EAFANVASHD IKEPLRHIEA
FAGLLGESIR EMGDERLGLM VSGIEKSSQR LRILINDLAE FSQLGRRSKP LAQTSLMEVA
QDVATDLHQR IEEAAAVVGI EQLPVAQCDR NQMRQVLQNL LSNALKYRHP GRPCRIRVYA
EQRSAEEPRG EVGRAAASTR ICVSDNGIGF DPKYAEQIFE PFQRLHGPDD YEGSGIGLAI
CRKIVQRHGG QVGVDTIPGS GSTFWFTLPI AVALSATP