Gene RPB_4334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4334 
Symbol 
ID3912147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4919634 
End bp4920641 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID637886238 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_487932 
Protein GI86751436 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0464074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTT CGACCCGCCC GCCGTTCCGA CCCGACCGCC GGACCATCTT GCGCGGCGCC 
GCAGCGCTCG GCGCGCTGCC GCTGCTGCCC GGCATCGCCC GCGCCGACAG CTGGCCGAGC
CGGCCGGTGA AGTTCATCGT GCCGTTCGCG GCCGGCGGCA CCACCGACAT TCTGGCGCGG
CTGGTGGCGC AGAAGATGTC GGAGGAGTAC GGCCAGCAAT TCATCGTCGA AAATAAGGCC
GGCGCCGGCG GCAACATCGC CGCCGACTTC GTCGCCAAGG CGGATCCCGA CGGCTACACC
TTCATCGTCG GCACGCCGGG CACGCACGCC ATCAATCAGT TCGTGTTCAA GTCGCTGAGC
TACGATCAGG CCAAGGACAT CGCGCCGGTG ATCGTCATCG CCAAGGTGCC GAACCTGTGC
TCGGTGACCA ATGCGCTGCC GGTGAAGAGC GTCGCCGAAC TGATCGCCTA CGCCAAGTCG
AAGCCGGGCG AAATATTCTA CGGCACACCC GGCCTCGGCT CGACCGCGCA TGTCTCGATC
GAGCTGTTCA AGTCGATGAC CGGCGCGCCG ATGACGCATG TGCCCTACAA GGGCTCGGCG
CCGATGCTGA CCGACCTGAT CGCCGGCCGC GTGCATTTCA CCATCGACAA TCTGCCGGCG
TCGCAACCCC ACGCCGACGG CGGAACGATC CGCGCGCTCG CGGTCTCGAC CGCGACGCGA
TGGCCGCTGC TGCCGGACCT GCCGACCATC GCCGAGGCCG GCGTGCCCGG CTACGACGCC
GCGGCGTGGT TCACGATCGG CGCGCCCGCG AAGATTTCGC CGGACATCGT CGCCAGGCTC
AACGCCAGCG TCGACAAATT CATCAAGACC GAGGAGGGCA CCGCGCGGCT GCGCAAGCTC
GGCGCCGATC CGGTCGGCGG TTCGCCCGCG GACATGCAGC GCTTCGTGCT CGCCGAAACC
GAAAAATGGG GCAAGGTCGC GAAGTTCGCC AAGATCGAGC CGCAGTAA
 
Protein sequence
MPSSTRPPFR PDRRTILRGA AALGALPLLP GIARADSWPS RPVKFIVPFA AGGTTDILAR 
LVAQKMSEEY GQQFIVENKA GAGGNIAADF VAKADPDGYT FIVGTPGTHA INQFVFKSLS
YDQAKDIAPV IVIAKVPNLC SVTNALPVKS VAELIAYAKS KPGEIFYGTP GLGSTAHVSI
ELFKSMTGAP MTHVPYKGSA PMLTDLIAGR VHFTIDNLPA SQPHADGGTI RALAVSTATR
WPLLPDLPTI AEAGVPGYDA AAWFTIGAPA KISPDIVARL NASVDKFIKT EEGTARLRKL
GADPVGGSPA DMQRFVLAET EKWGKVAKFA KIEPQ