Gene RPB_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4321 
Symbol 
ID3912134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4904361 
End bp4904987 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID637886225 
ProductUbiE/COQ5 methyltransferase 
Protein accessionYP_487919 
Protein GI86751423 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.701577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.237369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGA TCCATCAGGT GAAATTCTGG GACAAGGTCG CCGACCGCTA CGCGGCGCGG 
CCGATCAAGG ACCCGGCCGC GTTCGAGGCC ATGCTGGCCG ACGCCGCCGG CCGGTTGCGC
CCGACCGACC ATGTGCTGGA GATCGGCTGC GGCACCGGCT CGGCCGCGAT CCGCCTCGCG
CCGCATGCGG CGGAATGGAT CGCGACCGAT TTCTCGGCCG AGATGCTGCG CATCGCCCGC
GCCAAGCCGG CGCCGGCCAA TCTGCGCTTC GTCCTCGCCG ACGCAGAGCG CGCCTTCGAC
GGCGGACCGT TCGATGCGAT CTGCGCCTTC CAGGTGCTGC ATCTGGTCGG CGATCTGCCC
GGCACGCTGG CGCAGATCCG CGCCCATCTG AAGCCCGGCG GTCTGCTCAT CAGCAAGACC
TGGTGCTTCG CCGACATGTC GCTCAAGTTG CGCGCGCTGT TTTTCGTGCT GCGCAGCATC
GGCCTGTTCC CGCGCGCCCA GGCACTCACC AAACCCGCGC TGCGCCAGAC CCTGCGCGAC
GCCGGCTTCG AGATCGCCGA CGAACGCGTA TTCGGCGACA ATCCGCACGG GCCGTATATC
GTGGCAAGAA GGCCGGGGGC GACTTGA
 
Protein sequence
MAAIHQVKFW DKVADRYAAR PIKDPAAFEA MLADAAGRLR PTDHVLEIGC GTGSAAIRLA 
PHAAEWIATD FSAEMLRIAR AKPAPANLRF VLADAERAFD GGPFDAICAF QVLHLVGDLP
GTLAQIRAHL KPGGLLISKT WCFADMSLKL RALFFVLRSI GLFPRAQALT KPALRQTLRD
AGFEIADERV FGDNPHGPYI VARRPGAT