Gene RPB_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4292 
Symbol 
ID3912105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4877542 
End bp4878018 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content67% 
IMG OID637886196 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_487890 
Protein GI86751394 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.155454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTT CCGAGACCAG CCGTCCCAAC CGGCTGCCGT GGCCGCCGAT GCTGCTGACG 
CTGGCGGCGC TCGCGTCCAT CGGTCTCGGC GTGGTGGCGC CACTGACCGT GCCGCGCGCG
CAAGCGGTGG TGCTGATCGG CTATGCGATC GCGGGACTGG GGCTCGCTGT CGATCTCTGG
GCGATCCTGA CCATGCGCCG CGCGCGCACC AACATTCTGC CGCACCGCGC CGCCGACCGG
CTGGTCACCT GGGGGCCGTT CCGCTTCAGC CGCAATCCGA TCTATCTCGC CAATGCGTGG
CTGCTGATCG GCATCGGGAC GGCGTTCGGA AACGGCTGGT TCATCGTGTT CGCGCTGCTG
TCGGCGGTGG CGGTCGATCG GCTCGCAATC CGCCGCGAGG AACGCCATCT CGCGATCAAA
TTCGGCAACG ACTGGATAGA GTATTCGTCG AAGACGCCGC GCTGGCTGAT CCGATGA
 
Protein sequence
MTVSETSRPN RLPWPPMLLT LAALASIGLG VVAPLTVPRA QAVVLIGYAI AGLGLAVDLW 
AILTMRRART NILPHRAADR LVTWGPFRFS RNPIYLANAW LLIGIGTAFG NGWFIVFALL
SAVAVDRLAI RREERHLAIK FGNDWIEYSS KTPRWLIR