| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4214 |
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| Symbol | |
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| ID | 3912022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4786794 |
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| End bp | 4787696 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637886117 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_487816 |
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| Protein GI | 86751320 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.586864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAAGA TCGTCAACCA GAAGGCCTGG TTCCTGGTGC TGCCGGTGTT CGCCATCGTC
GCGTTCTCGG CGATCCTGCC GCTGATGACG GTGGTGAACT ATTCGGTGCA GGACACCTTC
GGCAACAACC AGTTCTTCTG GAACGGCGTC GGCTGGTTCA AGGAACTGCT CGATCCCTCG
ACCGATCTCG GCGGCCGGTT CTTCGCCTCG CTGGGGCGCA ATCTGGCGTT CTCGGCGATC
ATCCTCGCCA TCGAAGTCCC GCTCGGAATC GTGGTCGCGC TGGCGATGCC GCGCCACGGC
TGGTCGGTCG CGTTCTGCCT GGTGATCATG GCGTTGCCGC TGTTGATCCC GTGGAACGTG
GTCGGCACCA TCTGGCAAAT CTTCGGCCGG CCCGACATCG GCCTGATGGG CTACACGCTG
AACAGCCTCG GCATCAATTA CAACTACGTC TCCAACGAAT TCGACGCCTG GGCCACGGTG
GTGGTGATGG ACGTCTGGCA CTGGACCAGC CTGGTGGCGC TGCTTTGCTA TGCCGGCCTG
AAGTCGATCC CGGACGCCTA TTATCAGGCG GCGCAGATCG ACGGCGCGTC GCGCTGGGCG
GTGTTCAAGG CGATCCAGCT GCCGAAGATG CACCGGGTGC TGCTGATCGC CGTGCTGCTG
CGGTTCATGG ACAGCTTCAT GATCTACACC GAACCCTTCG TCGTCACCGG CGGCGGGCCG
GGCAATTCCA CGACCTTCAT CTCGATCGAG CTGGTCAAGA TCGCGCTCGG CCAGTTCGAC
CTCGGCAAAG CCGCGGCGCT GTCGATCGTC TACAATCTGA TCATCATCAT CGTGTGCTGG
GTGTTCTACA CCGTGATGAC CAACGCCGGC GCCGAGCGCC GGCAGACCCC CGGGAGCGCC
TGA
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| Protein sequence | MEKIVNQKAW FLVLPVFAIV AFSAILPLMT VVNYSVQDTF GNNQFFWNGV GWFKELLDPS
TDLGGRFFAS LGRNLAFSAI ILAIEVPLGI VVALAMPRHG WSVAFCLVIM ALPLLIPWNV
VGTIWQIFGR PDIGLMGYTL NSLGINYNYV SNEFDAWATV VVMDVWHWTS LVALLCYAGL
KSIPDAYYQA AQIDGASRWA VFKAIQLPKM HRVLLIAVLL RFMDSFMIYT EPFVVTGGGP
GNSTTFISIE LVKIALGQFD LGKAAALSIV YNLIIIIVCW VFYTVMTNAG AERRQTPGSA
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