Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4205 |
Symbol | |
ID | 3912013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4777513 |
End bp | 4778277 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637886108 |
Product | ABC transporter related |
Protein accession | YP_487807 |
Protein GI | 86751311 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.628741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC TCGAAACCCA GTCCCTCACC ATTCGCTTCG GCGGCCATGT CGCCGTCGAT GCGGTGAGCT GTGCGTTTCG GCCGGGGGAG CTGACCGCCA TTGTCGGGCC GAACGGCGCC GGCAAGACCA CCTATTTCAA CCTGATCTCC GGACAGTTGC GGCCGAGCGA GGGCCGCATC CTGTTCGACG GCGCGGACAT CACGCGGATG ACCGCGCCGC TGCGCACCCG CGCCGGGCTC GGCCGCGCGT TCCAGCTCAC CAACCTGTTT CCCAATCTCA GCGTCGAGGA GAACGTGCGC CTCGCAGTGC AGGCCCGCAG CGGCACGCAT TACGACATGT TGCGGCCGTG GCGGACGCGG CGCGACCTGA TCGACCGCGC CGACGCCATC CTCGACAGCG TCGCGCTGGG CAGCCGCCGC AGCGTCGCCG CCACCGCGCT GTCGCACGGC GACCAGCGCA AGCTCGAAGT CGCGCTGATG ATGGCGCTGG AGCCGAAGGT CTACATGTTC GACGAGCCGA CCGCCGGCAT GAGCGTCGAC GAGGTGCCGG TGGTGCTCGA TCTGATTGCG CGGCTGAAGA CCGATACGAG CAAGCTCATC CTGCTGGTTG AGCACAAGAT GGACGTGGTG CGCTCGCTCG CCGACCGCAT CATCGTGCTG CACAACGGCC GCCTCGTCGC CGACGGCAAG CCCGCCGAGG TGATCGCCTC GCCGATCGTG CAGGAAGCCT ATCTCGGCAT CGCCCCGGGA AAGAGCGCCG CATGA
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Protein sequence | MTTLETQSLT IRFGGHVAVD AVSCAFRPGE LTAIVGPNGA GKTTYFNLIS GQLRPSEGRI LFDGADITRM TAPLRTRAGL GRAFQLTNLF PNLSVEENVR LAVQARSGTH YDMLRPWRTR RDLIDRADAI LDSVALGSRR SVAATALSHG DQRKLEVALM MALEPKVYMF DEPTAGMSVD EVPVVLDLIA RLKTDTSKLI LLVEHKMDVV RSLADRIIVL HNGRLVADGK PAEVIASPIV QEAYLGIAPG KSAA
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