Gene RPB_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_4205 
Symbol 
ID3912013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4777513 
End bp4778277 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID637886108 
ProductABC transporter related 
Protein accessionYP_487807 
Protein GI86751311 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.628741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TCGAAACCCA GTCCCTCACC ATTCGCTTCG GCGGCCATGT CGCCGTCGAT 
GCGGTGAGCT GTGCGTTTCG GCCGGGGGAG CTGACCGCCA TTGTCGGGCC GAACGGCGCC
GGCAAGACCA CCTATTTCAA CCTGATCTCC GGACAGTTGC GGCCGAGCGA GGGCCGCATC
CTGTTCGACG GCGCGGACAT CACGCGGATG ACCGCGCCGC TGCGCACCCG CGCCGGGCTC
GGCCGCGCGT TCCAGCTCAC CAACCTGTTT CCCAATCTCA GCGTCGAGGA GAACGTGCGC
CTCGCAGTGC AGGCCCGCAG CGGCACGCAT TACGACATGT TGCGGCCGTG GCGGACGCGG
CGCGACCTGA TCGACCGCGC CGACGCCATC CTCGACAGCG TCGCGCTGGG CAGCCGCCGC
AGCGTCGCCG CCACCGCGCT GTCGCACGGC GACCAGCGCA AGCTCGAAGT CGCGCTGATG
ATGGCGCTGG AGCCGAAGGT CTACATGTTC GACGAGCCGA CCGCCGGCAT GAGCGTCGAC
GAGGTGCCGG TGGTGCTCGA TCTGATTGCG CGGCTGAAGA CCGATACGAG CAAGCTCATC
CTGCTGGTTG AGCACAAGAT GGACGTGGTG CGCTCGCTCG CCGACCGCAT CATCGTGCTG
CACAACGGCC GCCTCGTCGC CGACGGCAAG CCCGCCGAGG TGATCGCCTC GCCGATCGTG
CAGGAAGCCT ATCTCGGCAT CGCCCCGGGA AAGAGCGCCG CATGA
 
Protein sequence
MTTLETQSLT IRFGGHVAVD AVSCAFRPGE LTAIVGPNGA GKTTYFNLIS GQLRPSEGRI 
LFDGADITRM TAPLRTRAGL GRAFQLTNLF PNLSVEENVR LAVQARSGTH YDMLRPWRTR
RDLIDRADAI LDSVALGSRR SVAATALSHG DQRKLEVALM MALEPKVYMF DEPTAGMSVD
EVPVVLDLIA RLKTDTSKLI LLVEHKMDVV RSLADRIIVL HNGRLVADGK PAEVIASPIV
QEAYLGIAPG KSAA