| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4200 |
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| Symbol | |
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| ID | 3912008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4772482 |
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| End bp | 4773927 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637886104 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_487803 |
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| Protein GI | 86751307 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.306631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGTG AATCCGGGAA AAAACTGTTC GTCGGCCCCC GGTTCCGGCG AATCCGGCAG
CAACTCGGCC TGTCGCAGAC CCAGATTGCC GAAGGGCTCG GGATTTCGCC GAGCTATATC
AATCTGATCG AACGGAACCA GCGCCCCGTG ACCGCCCAGA TTCTGCTCAG GCTGGCGGAG
ACCTACGATC TCGATCTGCG TGACCTCGCG ACCGCCGACG AGGACCGTTT TTTCGCCGAA
CTCAACGAGA TCTTCTCCGA CCCGCTGTTC CGCCAGATCG ACCTGCCGAA GCAGGAACTG
CGCGACCTCG CCGAGCTGTG CCCCGGCGTC ACCCACTCGC TGCAGCGATT GTACGCCGCC
TACACCGAAG CGCGGCGCGG CGAGACGCTG GTCGCGGCGC AGATGGCCGA TCGCGACGAG
GGCACCAGGT TCGAGGCCAA CCCGATCGAG CGCGTCCGCG ACCTGATCGA GGCCAACCGC
AACTATTTCC CGGAGCTCGA GCAGGCCGCC GAGGCGGTGC GCGACGAACT GAATGTCGGC
TCGCAGGAGG TCTATGGCGC GCTCGCCGAC CGGCTGCGCG AGCGGCATTC GATCACCACC
CGGATCATGC CGGTCGACGT GATGCGCGAG ACGCTGCGCC GGTTCGACCG CCACCGCCGG
CAATTGCTGA TCTCCGAACT GGTCGACTCG CAGGGCCGCG CCTTCCAGGC CGCGTTCCAG
ACCGGCCTCA CCGAATATGG CAGCGTGATC GACGGCATCG TCAACCGCGC CGGCGCCCTC
GACGAGCCGG CGCGGCGACT CTACCGGATC ACGCTCGGCA ATTACTTCGC CGCCGCGCTG
ATGATGCCCT ACGCCGCTTT CCATGCCGCC GCCGAACAGC TCAGCTACGA TGTCAACGTG
CTGGCGCAGC GCTTCAACGC CGGCTTCGAG CAGGTCTGCC ATCGCCTCAC CACGCTGCAA
CGGCCGACCG CGCGCGGCGT GCCGTTCTTC CTGCTGCGGG TCGACAACGC CGGCAACGTC
TCCAAGCGGT TCTCCTCCGG CACCTTCCCG TTCTCGAAAT TCGGCGGAAC CTGCCCGTTG
TGGAACGTGC ACTCGACCTT CGATACGCCA GACCGGCTGC TGAAACAGGT GATCGAACTG
CCCGACGGCA GCCGCTATTT CTCGATCGCC CAGATGGTGC GCCGGCCGGT GGCGCCGCAC
CCGCAGCCGC AGCCGCGCTT CGCCATCGGG CTCGGCTGCG AAATCCGCCA CGCGTCGAAG
CTGACCTACG CCGCCGGCAT GGACCTGGAG AAAGCCGAAG GCACGCCGAT CGGCGTCAAC
TGCCGCCTCT GCGAACGCGA AAACTGCAGC CAGCGCGCCG AGCCGCCGAT CACCCGGACG
CTGATCCTGG ACGAGAACAC GCGGCGGGCG TCGAGCTTTG CGTTCAGCAA TGCAAGGGAG
TTGTGA
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| Protein sequence | MAGESGKKLF VGPRFRRIRQ QLGLSQTQIA EGLGISPSYI NLIERNQRPV TAQILLRLAE
TYDLDLRDLA TADEDRFFAE LNEIFSDPLF RQIDLPKQEL RDLAELCPGV THSLQRLYAA
YTEARRGETL VAAQMADRDE GTRFEANPIE RVRDLIEANR NYFPELEQAA EAVRDELNVG
SQEVYGALAD RLRERHSITT RIMPVDVMRE TLRRFDRHRR QLLISELVDS QGRAFQAAFQ
TGLTEYGSVI DGIVNRAGAL DEPARRLYRI TLGNYFAAAL MMPYAAFHAA AEQLSYDVNV
LAQRFNAGFE QVCHRLTTLQ RPTARGVPFF LLRVDNAGNV SKRFSSGTFP FSKFGGTCPL
WNVHSTFDTP DRLLKQVIEL PDGSRYFSIA QMVRRPVAPH PQPQPRFAIG LGCEIRHASK
LTYAAGMDLE KAEGTPIGVN CRLCERENCS QRAEPPITRT LILDENTRRA SSFAFSNARE
L
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