Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4092 |
Symbol | |
ID | 3911899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4662423 |
End bp | 4663304 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637885996 |
Product | phosphonate metabolism PhnJ |
Protein accession | YP_487696 |
Protein GI | 86751200 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3627] Uncharacterized enzyme of phosphonate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.419307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0436641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CACAATACAA CTTCGCCTAT CTCGACGAGC AGACCAAGCG GATGATCCGC CGCGCGATCC TGAAGGCGAT CGCGATCCCC GGCTATCAGG TGCCGTTCGC CAGCCGCGAG ATGCCGATGC CGTATGGCTG GGGCACTGGC GGCGTGCAGG TCACCGCAGC GATCCTCGGC CCGGACGACG TGCTGAAGGT GATCGATCAG GGCAGCGACG ACACCACCAA TGCGATCTCG ATCCGGAAAT TCTTCGCCAA GACCGCCGGC GTTGCGACCA CCACCAGCAC GACGGATGCC AGCGTGATCC AGACACGGCA CCGGATTCCG GAAGCGCCGC TGCACGAGGG CCAGGTGCTG GTGTATCAGG TGCCGATCCC GGAGCCGCTG CGCTTTCTCG AGCCGCGCGA GACCGAGACG CGGCGGATGC ACGCGCTCGC CGAATACGGG CTGATGCACG TCAAGCTGTA CGAGGACATC GCCAAATTCG GCCACATCGC GACGTCCTAC GCCTATCCGG TGAAGGTCAA TTCGCGCTAC GTGATGGACC CGTCGCCGAC GCCGAAATTC GACAATCCGA AGATGGACGA TTGCCCGGCG CTGCAATTGT TCGGCGCCGG CCGCGAAAAG CGGATCTATG CGATCCCGCC CTATACGCAC GTGGTGTCGC TGGACTTCCA GGACCATCCG TTCACGCGCT ATCGCCAGGA CGCGCCCTGC GCGCTGTGCG GATCGGAGGA GTCGTATCTA GACGAGATCG TCACCGACGA TCGCGGCGGA CGGATGTTCG TCTGCTCCGA CACCGATTAT TGCGAAACAC GTCAGGTGCA AGGCCATCGC GGCAGCGAAA GCGCGCCGCA TCAGGAGCGC GCAGATGCCT GA
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Protein sequence | MNAPQYNFAY LDEQTKRMIR RAILKAIAIP GYQVPFASRE MPMPYGWGTG GVQVTAAILG PDDVLKVIDQ GSDDTTNAIS IRKFFAKTAG VATTTSTTDA SVIQTRHRIP EAPLHEGQVL VYQVPIPEPL RFLEPRETET RRMHALAEYG LMHVKLYEDI AKFGHIATSY AYPVKVNSRY VMDPSPTPKF DNPKMDDCPA LQLFGAGREK RIYAIPPYTH VVSLDFQDHP FTRYRQDAPC ALCGSEESYL DEIVTDDRGG RMFVCSDTDY CETRQVQGHR GSESAPHQER ADA
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