| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_4091 |
|---|
| Symbol | |
|---|
| ID | 3911898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4661320 |
|---|
| End bp | 4662426 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885995 |
|---|
| Product | phosphonate metabolism |
|---|
| Protein accession | YP_487695 |
|---|
| Protein GI | 86751199 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3626] Uncharacterized enzyme of phosphonate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.658015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0458753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTCG CCGTCAAGGG TGGCGAGCGC GCCATCGACA ACGCCCACCG GCTGCTGGCG
CACGAGCGCC GCGGCGACCG CGCCGTGCCT GAACTGACAC TGGCGCAGAT TTCCGAACAG
CTCGCGCTCG GCGTCGACCG GGTGATGGTC GAGGGCTCGC TGTATGACCG CGAGTTGGCG
GCACTCGCCA TCAAGCAGGC CCGCGGCGAT CTGATCGAGG CGATCTTCCT GCTGCGCGCA
TTCCGCGCCA CGCTGCCCCG GTTCGGCGCC ACCGAACCGC TCGACACCGG CGCGATGGCG
GTGCGGCGGC GGGTGTCCTC GACCTTCAAG GATATTCCCG GCGGGCAGAT TCTCGGACCG
ACCTTCGACT ACACCCATCG GCTGCTCGAT CCGCAACTCG CCGCAGGCGG CGAGCCGGAT
CAGCCGGTCA ATGCGGAGGT GTCGAACGAA GCGATGCCGC GCGTCACCGA TATCCTCGGC
CGCGACGGAC TGATCGAGCC GTCGCCCGCG CCGGCCCCCG ATGCGCCGGT CGGCGACCTC
ACCCGCGAGC CGCTGAACTT TCCGGCGGAT CGCGATCTGC GGCTGCAAAA TCTGGCGCGC
GGCGACGAGG GCTTCCTGCT CGCGCTCGGC TACTCGACGC AGCGTGGCTA TGGCCGCTCG
CATCCGTTCG CCGGCGAAAT CCGCTTCGGC GAAGTCGAAC TGGAGTTCGT CGCCGAGGAC
GTCGGCTTCG CGGTGCCGCT CGGCAGCATC GCGCTGACAG AATGCCAGAT GGTCAATCAG
TTCAAGGGTT CGGCCACAGA GCCGCCCTGC TTCACCCGCG GCTACGGCCT CGCCTTCGGG
CAGAGCGAGC GCAAGACCAT GGCGATGGCG CTGGTCGATC GTGCGCTCCG CGCCAAGGAA
CTCGGCGAGG AGGCGCTGGC GCCGGCGCAG GACGAGGAAT TCGTGCTGTC GCATTCCGAC
AATGTGCAGG CGACCGGCTT CGTCGAACAT CTGAAGCTGC CGCATTATGT CGACTTCCAG
TCCGAGCTCG GACTGATCCG CCGGCTGCGG CAGGATTTTG CCGATGCCGC CGAGCAAGCG
GATGCGTTGC GGGAGGCCGC GGAATGA
|
|---|
| Protein sequence | MYVAVKGGER AIDNAHRLLA HERRGDRAVP ELTLAQISEQ LALGVDRVMV EGSLYDRELA
ALAIKQARGD LIEAIFLLRA FRATLPRFGA TEPLDTGAMA VRRRVSSTFK DIPGGQILGP
TFDYTHRLLD PQLAAGGEPD QPVNAEVSNE AMPRVTDILG RDGLIEPSPA PAPDAPVGDL
TREPLNFPAD RDLRLQNLAR GDEGFLLALG YSTQRGYGRS HPFAGEIRFG EVELEFVAED
VGFAVPLGSI ALTECQMVNQ FKGSATEPPC FTRGYGLAFG QSERKTMAMA LVDRALRAKE
LGEEALAPAQ DEEFVLSHSD NVQATGFVEH LKLPHYVDFQ SELGLIRRLR QDFADAAEQA
DALREAAE
|
|---|
| |