Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_4046 |
Symbol | |
ID | 3911853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4615940 |
End bp | 4616947 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637885950 |
Product | putative periplasmic solute-binding protein |
Protein accession | YP_487650 |
Protein GI | 86751154 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0699034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTG CTCGTTTCGC TGCGGCGCTG ATCGCGCTGT CGCTGTTCGC CGCCGCGCCG GCTGCAAAGG CCGCGGATGT GATCTGCTAC AATTGTCCGC CGCAATGGGC CGACTGGGCG TCGATGCTCA AGGCGATCAA GACGGACCTC GGCTACGACA TCCCGTTCGA CAACAAGAAC TCCGGCCAGG CGCTGTCGCA ATTGCTGGCC GAGAAGAGTA ATCCGGTTGC GGATATCGGT TATTTCGGCG TCAATTTCGG CATGAAGGCC AAGGCGCAGG GCGTCACCCA GCCCTACAAG CCGCAGCACT GGAACGAGGT GCCGGCCGGT CTCAAGGACG CCGATGGCGA ATGGACCGCG ATCCATTCCG GGACGCTCGG CCTGTTCGTC AATGTCGACG CGCTCGGCGG CAAGCCGGTG CCTGCGTGCT GGAAGGATCT GCTGAAGCCG GACTACAAGG GCATGGTCGG CTACCTCGAT CCGCCTTCGG CAGCGGTCGG TTATGTCGGC GCGGTCGCGG TCAATCTCGC GCTCGGCGGC AGCGACGCCG ACTTCTCGCC GGCGATCGGA TTCTTCAAGG CGCTGCACGG CAACGACGCC ATCGTGCCGA AGCAGACGTC CTACGCACGC GTCGTGTCGG GCGAGATCCC GATCCTGTTC GACTATGATT TCAACGCCTA CCGGGCCAAG TACACCGAGA AGGGCAAATT CGCCTTCGTC ATCCCGTGCG AGGGGTCGGT GGTGTTTCCC TATGTGGTCA GCCTGACCAA GGGCGCGCCG AACGCCGAGA AGGCGAAGAA GGTGATCGAC TATCTGTTGT CCGACAAGGG CCAGGCGATC TGGACCAACG CCTATCTGCG GCCGGCGCGA CCGATCGAAC TGCCCGAGGC GGTGAAGTCG AAATTCCTGC CGGACGCCGA CTACGCCCGC GCCAAGAGTG TCGACTGGGC CAAGATGGAA GCGGGCCAGA AGGCGTTCAC TGATCGCTAT CTTGCTGAGG TTCGCTGA
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Protein sequence | MTIARFAAAL IALSLFAAAP AAKAADVICY NCPPQWADWA SMLKAIKTDL GYDIPFDNKN SGQALSQLLA EKSNPVADIG YFGVNFGMKA KAQGVTQPYK PQHWNEVPAG LKDADGEWTA IHSGTLGLFV NVDALGGKPV PACWKDLLKP DYKGMVGYLD PPSAAVGYVG AVAVNLALGG SDADFSPAIG FFKALHGNDA IVPKQTSYAR VVSGEIPILF DYDFNAYRAK YTEKGKFAFV IPCEGSVVFP YVVSLTKGAP NAEKAKKVID YLLSDKGQAI WTNAYLRPAR PIELPEAVKS KFLPDADYAR AKSVDWAKME AGQKAFTDRY LAEVR
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