| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3962 |
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| Symbol | |
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| ID | 3911769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4523699 |
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| End bp | 4524619 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637885866 |
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| Product | AAA ATPase-like |
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| Protein accession | YP_487566 |
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| Protein GI | 86751070 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.157351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGACACGA CCTCCGCCGA CAATGAAGCC GCGTCGCAGG CCCCGATCGA TCTTCGCAAG
GAGTTCGAGG AGGTCGGCAT CGGCGAGGTG CTCGATCAGC TCGATCGCGA GCTGATCGGG
CTCCGCCCGG TCAAGACGCG GATCCGCGAG ATCGCGGCGC TGCTGCTGGT CGAACGGCTG
CGCAAGCGGA TGGGGCTCGC CACCGGCAAC CCGACCCTGC ACATGTCGTT CACCGGCAAT
CCCGGCACCG GCAAGACGAC GGTCGCGCTG CGGATCGCCT CGATCCTGCA CAGGCTCGGC
TTCGTCCGCC GCGGCCACGT GGTGTCCGTG ACGCGCGACG AACTGGTCGG GCAATATATC
GGCCACACCG CGCCGAAGAC CAAGGAGGTG CTGAAGAAGG CGATGGGCGG CGTGCTGTTC
ATCGACGAGG CCTACTATCT GTATCGCCCC GAAAACGAGC GGGATTACGG CCAGGAAGCG
ATCGAGATCC TGCTGCAGGT GATGGAGAAC CAGCGTGACG ATCTGGTGGT GATCCTCGCC
GGCTATGCCG ACCGGATGGA GAAATTCTTC GCCTCGAATC CGGGTTTCCG CTCGCGGATC
GCGCATCACA TAGATTTCCC CGACTACACC GACGGCGAGT TGCTCGGGAT CGCGGAAGGC
ATGCTGCGCG AACAGAACTA TCACTTCGAC GCGGACGCAC GTGCCGCGTT CGAGCGCTAC
ATCGCGGTGC GCAAGACGCA AGCACTGTTC GCCAACGCCC GCTCGATCCG CAACGCGCTC
GACCGCATCC GTCTGCGTCA GGCCAACCGC CTGATCGCCG ACCTCGATCG CAAGCTCAGC
GCCGACGATC TGATGAGGAT CGAGGCAAAG GACGTGCTGG CGAGCCGGGT GTTCGGCATG
GGGGAGGGTG GCGGAGGGTG A
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| Protein sequence | MDTTSADNEA ASQAPIDLRK EFEEVGIGEV LDQLDRELIG LRPVKTRIRE IAALLLVERL
RKRMGLATGN PTLHMSFTGN PGTGKTTVAL RIASILHRLG FVRRGHVVSV TRDELVGQYI
GHTAPKTKEV LKKAMGGVLF IDEAYYLYRP ENERDYGQEA IEILLQVMEN QRDDLVVILA
GYADRMEKFF ASNPGFRSRI AHHIDFPDYT DGELLGIAEG MLREQNYHFD ADARAAFERY
IAVRKTQALF ANARSIRNAL DRIRLRQANR LIADLDRKLS ADDLMRIEAK DVLASRVFGM
GEGGGG
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