Gene RPB_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3918 
Symbol 
ID3911723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp4470199 
End bp4470564 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content60% 
IMG OID637885820 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_487522 
Protein GI86751026 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.734494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAT GTTTGGTGGT CGACGATTCG AGCGTGATCC GAAAGGTCGC GCGACGCATT 
CTCGAAGGCC TCGACTTCGA GATCGTCGAA GCTGAGGACG GCGAGAAGGC GCTCGAACTC
TGTAAGAACG GGTTGCCCGA CGCGGTGCTG CTCGACTGGA ACATGCCGGT GATGGACGGC
TACGAATTCC TGCGCAATCT GCGCCGGATG CCGGGCGGCG ATCACCCGAA AGTGGTGTTC
TGCACCACCG AGAACGACGT CGCGCACATC GCGCGGGCGC TGCATGCCGG CGCCAACGAG
TACATTATGA AGCCGTTCGA CAAGGACATC GTCACGGCGA AGTTCCAGGA AGTCGGCCTG
ATCTGA
 
Protein sequence
MKTCLVVDDS SVIRKVARRI LEGLDFEIVE AEDGEKALEL CKNGLPDAVL LDWNMPVMDG 
YEFLRNLRRM PGGDHPKVVF CTTENDVAHI ARALHAGANE YIMKPFDKDI VTAKFQEVGL
I