| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3882 |
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| Symbol | |
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| ID | 3911686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4436412 |
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| End bp | 4437638 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885783 |
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| Product | hypothetical protein |
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| Protein accession | YP_487486 |
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| Protein GI | 86750990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00664536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCT GGCTGCCGTT CGCCTGGATC GCCGCGGTGC GCTTCCTGCT CGACGGCGCA
CTGCAGACGC TGGTGATCGT CGGCGGCATC GCCATCGGCG TCGGCGTCAT CGTCTTCATG
TCGGCGATGC TGGCGGGGCT GCAGGCGAAC TTCATCAAGC GCGTGCTCAC CTCGCAGCCG
CAGATCCAGC TGATCCCGCC GGATCAGGTG GCGCGGCCGC TGCGCGACGA GCCGGGCACC
GTCGAGATCG CGACGGTGCA GCGCCCGACC CAGCGGGTGA TTTCGATCGA CCAATGGCCG
AAGATCCGCG CCGAGATGCA GGCGCGGCCG GACGTCGTCT ACGCCGCCGC CACCGCGTCC
GGCTCGGCGC TGGCGCTGCG CGGCGACACC AGCCGCGCCA TCACGCTGTA CGGCATCGAG
CCGGAGATCT ATTTCCAGAT CGTCAAGGTG CCGGATTTCA TCGTCGCCGG CGAAGCCCAG
ATCACCACCG AGGGCATCCT GATCGGCGTC GAACTGGCGC GCGATCTCGG CGCCTCGCTC
GGCGACAAGC TCATCGTGTC GACCTCGCTC GCCGGCAATC GCGTCCTCAC CATCAAGGGC
ATCTTCGATT TCGGCAACAA GGCCGCCAAT CAGCGCAACA CCTTCGTGAC GCTGCGCAAC
GCCCAGAGCA TGCTCGGCCT GATCGGCGGC ATCACCTCGG TCGACATCAC CGTGGCGGAC
ATCTACACCG CCGAGACCAT CGCGCAGGAG ATCCAGGCGA CGTTGCCGGT GAAGGCCGAC
AGCTGGATCA GGACCAACGC GCAGTTCTTC ACCGCGGTGA AGGCGCAGCA GAATTCCAAC
ACGCTGATCC GGCTGTTCGT CGGCCTGTCG GTGGCGTTCG GCATCGCGGC GGTGCTGATC
GTCTCGGTGA TCCAGCGCTC CAAGGACATC GGCATCCTGC GCGCGATGGG CGCGCGCCGC
GGGCAGATCC TGCGCGTGTT CCTGATCCAG GGCGGGCTGC TCGGCTTCGT CGGCGCGCTG
ATCGGCTCCG GCCTCGGCGC GCTCGCGCTG TTCGTGTGGC ACCAGTCGGC GCGCCAGGTC
GACGGCAGCG AGCTGTTTCC GCTGATCCTC GAATCCGAAT TGTTCATCGC GTCGTCGCTG
CTGGCGACGC TCACCGGCGT CGCGGCGGCG ATCGCGCCGG CGCTGCGCGC GGCGCGGCTC
GATCCGGTGG TGGCGATCCG TGGCTGA
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| Protein sequence | MKRWLPFAWI AAVRFLLDGA LQTLVIVGGI AIGVGVIVFM SAMLAGLQAN FIKRVLTSQP
QIQLIPPDQV ARPLRDEPGT VEIATVQRPT QRVISIDQWP KIRAEMQARP DVVYAAATAS
GSALALRGDT SRAITLYGIE PEIYFQIVKV PDFIVAGEAQ ITTEGILIGV ELARDLGASL
GDKLIVSTSL AGNRVLTIKG IFDFGNKAAN QRNTFVTLRN AQSMLGLIGG ITSVDITVAD
IYTAETIAQE IQATLPVKAD SWIRTNAQFF TAVKAQQNSN TLIRLFVGLS VAFGIAAVLI
VSVIQRSKDI GILRAMGARR GQILRVFLIQ GGLLGFVGAL IGSGLGALAL FVWHQSARQV
DGSELFPLIL ESELFIASSL LATLTGVAAA IAPALRAARL DPVVAIRG
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