| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3849 |
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| Symbol | |
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| ID | 3911653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4401947 |
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| End bp | 4402729 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637885750 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_487453 |
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| Protein GI | 86750957 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGG GAATCAAGGG CCGCCGCGCG CTGGTCTGCG CATCGAGCAA GGGACTGGGC
CGCGCCTGCG CCGCGGCGCT CGCAGCCGAA GGCGTGCATG TGACGATGAC GGCGCGCGGC
GCGGAAGCGC TGGCCCAGGC TGCGGCCGAT CTGCGAAAGG CCTATCCGGA TGTCGAGATC
ATCGAAGTGG CCGGAGACAT CACCACGCCC GAAGGGCGCG CCGCCGCGCT GCAGGCCTGC
CCGGAGCCCG ACATTCTGGT GAACAATGCC GGCGGTCCGC CGCCCGGCGA TTTCCGCAAC
TGGACCCGCG ACGACTGGAT CAAGGCGCTC GACGCCAACA TGCTGACGCC GATCGAACTG
ATCAAGGCGA CCGTCGACCA GATGATCGCG CGAAAATTCG GCCGGATCGT CAACATCACC
TCGGCCGCAG TCAAGGCGCC AATCGACGTG CTCGGCCTGT CCAATGGCGC GCGCACCGGG
CTGACCGGCT TCGTCGCCGG GCTGTCGCGC AAGACCGTGC GGCACAATGT GACGATCAAC
GCGCTGCTGC CGGGCCCGTT CGACACCGAC CGGCTGCGCG GCGTGTCCGC CGGCCAGGCT
AAAGCCTCCG GCGTGCCGGT GGAGCAGATC CTGCAGACGC GGATGAACGA GAACCCGGCC
GGCCGGTTCG GCGATCCGGA AGAGTTCGGA CTCGCCTGCG CATTCTTGTG CGGCGCAAAA
TCCGGCTACA TCACCGGCCA GAACATCCTG CTCGACGGCG GCGCCTTCCC CGGCACGCTG
TGA
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| Protein sequence | MDLGIKGRRA LVCASSKGLG RACAAALAAE GVHVTMTARG AEALAQAAAD LRKAYPDVEI
IEVAGDITTP EGRAAALQAC PEPDILVNNA GGPPPGDFRN WTRDDWIKAL DANMLTPIEL
IKATVDQMIA RKFGRIVNIT SAAVKAPIDV LGLSNGARTG LTGFVAGLSR KTVRHNVTIN
ALLPGPFDTD RLRGVSAGQA KASGVPVEQI LQTRMNENPA GRFGDPEEFG LACAFLCGAK
SGYITGQNIL LDGGAFPGTL
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