| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3840 |
|---|
| Symbol | |
|---|
| ID | 3911643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 4386405 |
|---|
| End bp | 4387448 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637885740 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_487444 |
|---|
| Protein GI | 86750948 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCCGC ATCGGCCGCC ACAAGTCTCG GTGATCCTGC CGGTTCGCGA CGGCCAGCGC
TGGCTGCGCG AGGCGGTCGA CAGCGTGCTG GCGCAGACCT TGTCCGATCT CGAACTCCTG
GTGATCGACG ACGGCTCGAC CGACGCGACG CCGGCGATCC TCGATGAAGC GCGCGCCCGC
GATCCGCGTG TCGTCGTGCT GCGGCAGAGC CGCGAGGGGC TGGTCGCGGC GCTCAATCTG
GGCCTGGCGC GGGCCCGCGC GCCGCTGATC GCGCGACTCG ACGCCGACGA CATCGCGCTG
CCGGAGCGGC TCGCGCGGCA GCGCGACTAT CTGCAGGCGC ACCCGGACGT CGTGCTGCTC
GGCGGCTGGG CCGAGATCAT CGACGCCCAG GGCGCATCGT CCGGCCGCCA GATGCGGCCG
AGCCCGGACG GCCTGCGCGA GACGCTGACC AAGAAGAGCC CGTTCATCCA TCCGACGGTG
ATGTTCCGCA CAGACGCCGC GCGGCGCATC GGCGGCTATC GCGCCGCCTT CGAGGCCGGC
GAGGATTATG ATTTCTGGCT GCGCCTCGCC GATATCGGCG CCATCGCCAT CCTGCCCGAG
GTGCTGATCC GCTATCGCGA GCACGGCGGC AGCGTTACAC GCACCCGCGA GTTGCGGCAG
ATCTATTCCG CCCGCCTCGC CAAGCTCGCC AGCGCCGCCC GCAGCCACGG CGGCCCCGAT
CCCTCGGCGA TCTTGACCGC GCCGCCCGAC TGGCACGATG ACGATCCCGG CAATTTCGAG
CGCGACAGCT CGCGGCTGTT CCGGATGCTA GAACTCGCCG ACCCCTCGCT GGCGCGCACG
GCGCCAGCGT CCGCGATCGA CCTCGCTGCG ATCACCTCGC AGCGATCCAC GCTGACCGCC
GGCGAACGGA AGTTCGCGCA AGCCGCATTG CTGAACCTGC TGCGCGAGCG CCGCGACCTC
CCGGTCTCCC GCGCCAGGCT GATCGCCCTG CTGCTATGGC TGGGACCGGC GAAGGCGATG
AAGAAGCTGA TACGGACGAA GTAA
|
|---|
| Protein sequence | MSPHRPPQVS VILPVRDGQR WLREAVDSVL AQTLSDLELL VIDDGSTDAT PAILDEARAR
DPRVVVLRQS REGLVAALNL GLARARAPLI ARLDADDIAL PERLARQRDY LQAHPDVVLL
GGWAEIIDAQ GASSGRQMRP SPDGLRETLT KKSPFIHPTV MFRTDAARRI GGYRAAFEAG
EDYDFWLRLA DIGAIAILPE VLIRYREHGG SVTRTRELRQ IYSARLAKLA SAARSHGGPD
PSAILTAPPD WHDDDPGNFE RDSSRLFRML ELADPSLART APASAIDLAA ITSQRSTLTA
GERKFAQAAL LNLLRERRDL PVSRARLIAL LLWLGPAKAM KKLIRTK
|
|---|
| |