| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3714 |
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| Symbol | |
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| ID | 3911516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4252697 |
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| End bp | 4254061 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637885616 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_487320 |
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| Protein GI | 86750824 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AGATCAAGTA CGTCCTGGAC GAGGAGAACA TCCCGAAGTC CTGGTACAAT
CTCAATGCCG ACTTTCCCAA GCCGGTACCC GACGTGCTGC ATCCGGGCAC GCATCAGCCG
GTCGGCCCGT CCGATCTGGA GCCGCTGTTT CCGATGGAGC TGATCCTCCA GGAGGTCGCC
ACCGATCGCT ACATCGACAT TCCCGCGCCG GTGCGCGACG TGTTCCGGAT GTGGCGGCCG
TCGCCGCTGG TGCGTGCGCG CCGCCTCGAG CAGGCGCTCG GCACGCCGGC CAAGATCTAC
TACAAATACG AAGGCGTCTC GCCGGCCGGC TCGCACAAGC CGAACACCGC GGTGCCGCAG
GCCTGGTACA ACAAAGAGGC CGGCATCAAG AAGCTGTCGA CCGAGACCGG TGCCGGGCAG
TGGGGCTCGT CGCTGGCCTT CGCCGGCTCG CTGTTCGGGC TCGACGTGCT GGTGTTCCAG
GTCCGCGTCT CGTTCGACCA GAAACCGTAT CGCCGCGCGC TGATGGAAAC CTACGGCGCG
CGCTGCATCG CCTCGCCCTC GACCGAGACC GAGTCCGGCC GCGCCATCCT GGCGCAGCAT
CCCGACAGCC CCGGCTCGCT CGGCATCGCG ATCTCCGAAG CCGTCGAAGT CGCGGCGAAG
AATCCGGATA TCAAATACGC GCTCGGCTCG GTGCTCAATC ACGTCATGCT GCACCAGACC
ATCATCGGCC AGGAAGCGAT CAAGCAGTGC GAAATGGCCG GTGACGATCC CGACGTGATC
ATCGGCTGCG CCGGCGGCGG CTCGAATTTC GCAGGCCTTG CGTTCCCGTT CCTCGGCCTG
CAGCTGCGCG GCGGCCGGTC GCGGCGGATC ATCGCGGTCG AGCCCGCGGC GTGCCCGACG
CTGACGCGCG GCACCTACGC CTATGATTTC GGCGACACCG CGCATCTGAC GCCCTTGGTG
AAGATGCACA CGCTGGGCTC GACCTTCATT CCGCCGGGCT TCCACGCCGG CGGCCTGCGC
TATCACGGCA TGAGCGGGAT GGTGTCGCAC GCCTACGAGC TCGGCCTGAT CGAGGCGCGT
GCCTATCACC AGGTGAAGTG CTTCGAAGCC GGCGTGCAGT TCGCCCGCAA CGAGGGCATC
GTGCCGGCGC CGGAATCGAC CCACGCGGTG CGCTGCGCGA TCGACGAGGC GCTGCGCTGC
AAGGCGGAGG GCAAGGCGGA GACGATCCTG TTCAACCTCT CGGGTCACGG CCATTTCGAC
ATGCAGGCCT ACATCAACTA CTACGAAGGC AAGCTCGTCG ACGTCGACTA CAACGAAGCC
GACCTCGCGA CCGCGCTGGC GGGCCTGCCG GCGGTGGCGG CTTAG
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| Protein sequence | MSDQIKYVLD EENIPKSWYN LNADFPKPVP DVLHPGTHQP VGPSDLEPLF PMELILQEVA
TDRYIDIPAP VRDVFRMWRP SPLVRARRLE QALGTPAKIY YKYEGVSPAG SHKPNTAVPQ
AWYNKEAGIK KLSTETGAGQ WGSSLAFAGS LFGLDVLVFQ VRVSFDQKPY RRALMETYGA
RCIASPSTET ESGRAILAQH PDSPGSLGIA ISEAVEVAAK NPDIKYALGS VLNHVMLHQT
IIGQEAIKQC EMAGDDPDVI IGCAGGGSNF AGLAFPFLGL QLRGGRSRRI IAVEPAACPT
LTRGTYAYDF GDTAHLTPLV KMHTLGSTFI PPGFHAGGLR YHGMSGMVSH AYELGLIEAR
AYHQVKCFEA GVQFARNEGI VPAPESTHAV RCAIDEALRC KAEGKAETIL FNLSGHGHFD
MQAYINYYEG KLVDVDYNEA DLATALAGLP AVAA
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