Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3681 |
Symbol | |
ID | 3911483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4220618 |
End bp | 4221535 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637885583 |
Product | inner-membrane translocator |
Protein accession | YP_487287 |
Protein GI | 86750791 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.911027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTATT TCGCTCAGCA GCTCATCAAC GGCCTCGTCC TCGGCTCGAT CTACGGCCTG ATCGCGATCG GCTACACGAT GGTCTACGGC ATCGTCGGCA TGATCAATTT CGCCCATGGT GACATTTTCA TGATCGGCGG CTTCATCGCC CTGATCAGCT TCCTGATCCT GGTGTCGTTC GGCCTCACCT TCGTGCCGCT GATCCTGCTG GTGGTGCTGC TGGTGTCGAT GGCGATCACG GCGCTGTACG GCTGGACGGT CGAGCGCATC GCCTATCGCC CGCTGCGGAA TTCGTTCCGG CTCGCGCCGA TGCTGTCGGC GATCGGCATG TCGTTCGTGC TGATGAATTT CGCGCAGGTC GCCCAGGGCG CCCGAGTCAA GCCGGTGCCG CCGATCATCA CCGGCGGCTA CACGCTTCAC GAGAGCGCCG ACGGCTTCAA CGTTCAGCTT TCCAATGTGC AGATCGTGGT GGTGATCACC ACGATCGTGC TGCTCGCGAT CTTCACATGG CTGGTGGCGA AAACCCGGCT CGGCCGCGAC ATGCGCGCCT GCGAGCAGGA CCGGACCATG GCCTCGCTGC TCGGCGTCGA CGTCGACCGC ACCATCTCGA TGACCTTCGT GATCGGCGCC GCGCTCGCCT CGGTCGCGGG CATGATGTAC CTGCTGTATT ACGGCTTGGT CGATTTCTTC ATGGGATTCG TCGCCGGCAT CAAGGCGTTC ACCGCGGCCG TGCTCGGCGG CATCGGTTCG CTGCCCGGCG CGATGCTCGG CGGCCTGCTG ATCGGGCTGA TCGAGACGTT CTGGTCGGCC TATTTCTCGG TCGAGTACAA GGACGTCGCG GCGTTCTCGA TCCTCATCGT CGTGTTGATC TTCATGCCGA CCGGCCTGCT GGGCCGGCCG GAAGTCGAAA AAGTCTGA
|
Protein sequence | MDYFAQQLIN GLVLGSIYGL IAIGYTMVYG IVGMINFAHG DIFMIGGFIA LISFLILVSF GLTFVPLILL VVLLVSMAIT ALYGWTVERI AYRPLRNSFR LAPMLSAIGM SFVLMNFAQV AQGARVKPVP PIITGGYTLH ESADGFNVQL SNVQIVVVIT TIVLLAIFTW LVAKTRLGRD MRACEQDRTM ASLLGVDVDR TISMTFVIGA ALASVAGMMY LLYYGLVDFF MGFVAGIKAF TAAVLGGIGS LPGAMLGGLL IGLIETFWSA YFSVEYKDVA AFSILIVVLI FMPTGLLGRP EVEKV
|
| |