Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3666 |
Symbol | |
ID | 3911468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4207840 |
End bp | 4209012 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637885568 |
Product | hypothetical protein |
Protein accession | YP_487272 |
Protein GI | 86750776 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.335217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.695679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCG CGGACGACAG CGCCACCGGC CGCATCCAGC CGATCAAGCC TCCGCGTTTC GGCTTCCTGC GCCGCACCTA TGCGATGCTG GTGAAGGAAC TGATCCAGCT CCGCCGCGAC CGTCTCACCT TCGCGATGAT CGTGGTGATC CCGGTGATGC AGCTCCTGCT GTTCGGCTAC GCCATCAACA CCACGCCCCG GCATCTGCCG ACCGCGGTGC TGCTCCAGGA GGACAGCGAT CTCGGGCGTT CGATCCTGAA GGCGCTGGAG AACACAGCGT ATTTCGATTT CGTCCAGGAG GTGCAGAGCG TCGAGCAGTT CGACAATCTG CTGTTGTCCG GCAAAGTGCT GTTCGGCGTC GAGATCCCGC GCGGCTTCGA GCGCGCGGTG CGGCGCGGCG AGCGGCCGGC GCTGCTGGTC GCCGCCGACG CCACTGATCC GGTCGCGGCC GGCTCTGCCC TGTCGGCTCT CGGCCGGATC GTGCAGACCG CGCTGGAGCA CGACCGCGTC GCCGGCGATC CCGGCAATCC GCCGTTCGAG ATCCGCGCGC ATGCGCGCTA CAATCCGGCG GCGTCGTCGC GGCTCAACAT CGTGCCCGGC CTGGTCGGCA CCATCCTGAC GATGACCATG CTGATCTTCA CCGCGCTGTC GGTGACGCGC GAGATCGAAC GCGGCACCAT GGAAAACCTG CTGTCGATGC CGATCACACC GGTCGAGGTG ATGCTCGGCA AGATCCTGCC TTATGTCGGC GTCGGCTTCA TTCAGGCGTC GCTGATCATC GGCATCGGCG TGTTCTTGTT CGGCGTGCCG CTGCGCGGCA GCCTGTTGCT GCTGGCGCTG CTGTCGACGT TGTTCATCAC CACCAATCTG GCGATCGGCT ACACTTTCTC GACGCTGGTG CAGAACCAGT TGCAGGCGAT GCAGGCCTCG ATGATGTTCT TCCTGCCGTC GATCCTGCTG TCCGGCTTCA TGTTCCCGTT CGCCGGGATG CCGCAATGGG CGCAGTATCT CGGCGAATGC CTGCCGCTGA CGCATTATGT GCGGATCGTC CGGGCGATCA TGCTGAAGGG ATCGACGCTG GAGAATCTGC GCTACGACAC GCTGGCGCTG GCGGCCCTGA TGCTGATAGC GATGACGATC GCGGTGACCC GATTCCGCAG GACGCTGGAC TGA
|
Protein sequence | MSAADDSATG RIQPIKPPRF GFLRRTYAML VKELIQLRRD RLTFAMIVVI PVMQLLLFGY AINTTPRHLP TAVLLQEDSD LGRSILKALE NTAYFDFVQE VQSVEQFDNL LLSGKVLFGV EIPRGFERAV RRGERPALLV AADATDPVAA GSALSALGRI VQTALEHDRV AGDPGNPPFE IRAHARYNPA ASSRLNIVPG LVGTILTMTM LIFTALSVTR EIERGTMENL LSMPITPVEV MLGKILPYVG VGFIQASLII GIGVFLFGVP LRGSLLLLAL LSTLFITTNL AIGYTFSTLV QNQLQAMQAS MMFFLPSILL SGFMFPFAGM PQWAQYLGEC LPLTHYVRIV RAIMLKGSTL ENLRYDTLAL AALMLIAMTI AVTRFRRTLD
|
| |