| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3604 |
|---|
| Symbol | |
|---|
| ID | 3911406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 4136168 |
|---|
| End bp | 4137163 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637885506 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_487210 |
|---|
| Protein GI | 86750714 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.252193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAA CGGCTTTTGT CGAGGCGCTG GCGCGCAGCG TGCGATCGTG GTGCGCCGGC
GCGACCGGCG TCCGCGACGT CGCGCAACTC TCCGGCGGCG CCAGCCAGGA GACCTGGTCG
TTCGTGATCG AGCGGCCGGA CGGCGACATC GCGGCGATCC TGCGCCGCTC GCCGCCGGGC
TATGGCAGCG TTTCCGGACG CGCCGCGGGG CTGGAGGTCG AAGCCGAATT GATGCGGCTC
GCTGACGAGG CCGGGGTGCC GTCGCCGCGC GTGCTGCACG TTCTCACCGA GCGTGACGGG
CTCGGCGACG GTTTTTTGAT GCAGAAGGTG GAGGGCGAAA CCATCCCGCG CAAGATCCTG
CGCGACGAAC TATTCGCCGC CGCACGGCCG AAACTGGCGC GGCAGATCGG CACCATCCTC
GCCGGCCTGC ACGGCATCGA CAGCGCCGCG CTGCCGGGCT TGCGGACGAT CAGTTCGACG
CAGGAGATCG AGCTGCTGCG CGCCGACTAT CGCAGCATGG ATTGGCCGCG GCCGGTGTTC
GAACTGGCGC TGCGCTGGCT CGCCGATCAC GACCCCGGCG TCTCCAAGCA GATCACGCTG
GTGCACGGCG ATTTCCGCCA CGGCAATCTG ATCATCGGGC CCGACGGCGT GCGCGCCGTG
CTCGATTGGG AACTCGCGCA TCGCGGCGAC CCGATGGAAG ACCTCGGCTG GGTCTGCGTC
AATTCGTGGC GGTTCGGCGA GATCGACAGA CCGGTCGGCG GGCTCGGCTC GCGCGAGGAG
ATGTTCGCGG GCTATCAGGA CGCCGGCGGA ACCGTCGATG CCGATCGGGT CAAATTCTGG
GAAGTAATGG GCACGTTGCG CTGGGGCATC ATGTGCTGCG GCATGATGCA GCGGTTTCGG
CAGGGTCCCG ACCACTCGAT GGAACGCGCG ATGATCGGGC GCCGCTCGTC GGAAACCGAG
ATCGATCTGC TGCGGTTATT GGCGCCGCGC GCCTAG
|
|---|
| Protein sequence | MAATAFVEAL ARSVRSWCAG ATGVRDVAQL SGGASQETWS FVIERPDGDI AAILRRSPPG
YGSVSGRAAG LEVEAELMRL ADEAGVPSPR VLHVLTERDG LGDGFLMQKV EGETIPRKIL
RDELFAAARP KLARQIGTIL AGLHGIDSAA LPGLRTISST QEIELLRADY RSMDWPRPVF
ELALRWLADH DPGVSKQITL VHGDFRHGNL IIGPDGVRAV LDWELAHRGD PMEDLGWVCV
NSWRFGEIDR PVGGLGSREE MFAGYQDAGG TVDADRVKFW EVMGTLRWGI MCCGMMQRFR
QGPDHSMERA MIGRRSSETE IDLLRLLAPR A
|
|---|
| |