| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3544 |
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| Symbol | |
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| ID | 3911346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 4054687 |
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| End bp | 4056042 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885446 |
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| Product | parallel beta-helix repeat-containing protein |
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| Protein accession | YP_487150 |
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| Protein GI | 86750654 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.502732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.506953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCG ACCGGCGCCG TTTGATCGGA CTGACAGCCG GCGCGCTGGC GCTGTCGGCG
GCGCCACTCG CCGCGCAGCC GCTCACCTCG CAACGCGGCC GCGACGCCAC GCAGGCCGGC
CTTCGCCCCG ACAGTTCCGA CGACCAGACC GCGGCCCTGC AGCGCGCGAT CGACAGCGCC
GCCCGCGCCC GCGTCCCGCT GGCGCTGCCG CCGGGCCATT ATCGCACCGG CCCACTTCGG
TTGCCGTCGG GCGCGCAGCT CAGCGGCGTG CGCGGCGCGA CGCGACTCGT CTTCACCGGC
GGCGTCTCGC TGTTCGACAG CGCCGGCGCC GAGACGCCGA CGCTCAGCGG CCTCGTCCTC
GACGGTGGCG CCATCCCGCT GCCGGCGCGG CGCGGCCTGG TGCATTGCGT CGGCGCGCGC
GACCTGCGGA TCACCGATTG CGAGATCACC GCCAGCGGCG GCTGCGGCGT CTGGCTGGAA
ACCACCTCGG GCATGATCAG CGACAACACG CTGACCGCGA TCGCGGTCAC CGGCGTGGTG
TCGTTCGACG CCAAGGGGCT GAGCGTGACG CGCAACACCA TCATCGGCGC CAACTCAAAC
GGCGTCGAGA TCCTGCGCAC CTCGATCGGC GACGACGGCA CGCTGGTCAC CGGCAACCGG
ATCGAGAACA TCAAGGCCGG CCCCGGCGGC TCGGGGCAGT ACGGCAACGC CATCAACGCG
TTTCGCGCCG GCAACGTCAT CGTCAGCGGC AACCGGATCA GGAACTGCGA TTACTCCGCG
GTGCGCGGCA ATTCGGCGTC GAACATCCAC ATCACCGACA ACAGCGTCAG CGACGTGCGC
GAGGTCGCGC TGTATTCGGA ATTCGCGTTC GAAGGTGCGG TGATCTCGGG CAACACCGTC
GACGGCGCAG CGCTCGGCGT CTCGGTGTGC AACTTCAACG AGGGCGGCAG GCTCTCGGTC
GTGCAGGGCA ACATCATCCG CAACCTCAAG CCGAAGCGGC CGATCGGCAC CGCGCCGGAC
GACGACGCCG GCATCGGCAT CTATGTCGAG GCCGACACCG CAGTGACCGG CAATGTGATC
GAGAACGCAC CGTCGTTCGG CATCGTCGCC GGATGGGGCA AGTACCTGCG CGATGTCGCC
ATCACCGGCA ATGTCGTGCG CAGGGCGTTC ATCGGCATCG GCGTCTCGGT GATGGACGGC
GCCGGCACGG CCGCGATCAA CGGCAACGTC ATCGCCGAAG CGCCGCGCGG CGCCGTGGTC
GGGCTCGACC ACGCCCGCCC GGTGACGCCG GACCTCACCG CGCCCGGCGC AGCCAAATTC
GCGCAGATCG CCCTCGGCAG CAACTCGGTG CGGTGA
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| Protein sequence | MTLDRRRLIG LTAGALALSA APLAAQPLTS QRGRDATQAG LRPDSSDDQT AALQRAIDSA
ARARVPLALP PGHYRTGPLR LPSGAQLSGV RGATRLVFTG GVSLFDSAGA ETPTLSGLVL
DGGAIPLPAR RGLVHCVGAR DLRITDCEIT ASGGCGVWLE TTSGMISDNT LTAIAVTGVV
SFDAKGLSVT RNTIIGANSN GVEILRTSIG DDGTLVTGNR IENIKAGPGG SGQYGNAINA
FRAGNVIVSG NRIRNCDYSA VRGNSASNIH ITDNSVSDVR EVALYSEFAF EGAVISGNTV
DGAALGVSVC NFNEGGRLSV VQGNIIRNLK PKRPIGTAPD DDAGIGIYVE ADTAVTGNVI
ENAPSFGIVA GWGKYLRDVA ITGNVVRRAF IGIGVSVMDG AGTAAINGNV IAEAPRGAVV
GLDHARPVTP DLTAPGAAKF AQIALGSNSV R
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