| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3524 |
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| Symbol | |
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| ID | 3911326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4032284 |
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| End bp | 4033912 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885426 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_487130 |
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| Protein GI | 86750634 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.617806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.525721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCGC AGAATGATCA GCGCGTGGCG GGACGGGGCA TCCGGCAGAG CATGTCCGGC
CTGCACACCT GGGCCGGGCT GCTGCTCGGC TGGGTGCTGT ATGCGATGTT CCTCACCGGA
ACGGTGTCGT TCTTCAAGGA GGAGCTGTCG CAATGGATGC GGCCGGAGCA GCCGCGTCTG
ACCCAGCCGC TCGATCCAGC GGTGGTGGCG CAGCGCGTCG CCGACGAGAT CGGCGCGATC
GCGCCGGGCG CGACGCAGTG GAGCATCAAG CTTCCCGACG GACGCAGCAA CACCGTCTAC
GCGTTCTGGC GGCTTCCCGG CGGCGGACCG GGCGCGCGGG GGTTCGGACA GGATCTGTTC
GATCCGGTGA CCGGCCATCG CGTCGCGGCG CGCCTCACGC TCGGCGGCGA CTTCTTCTAT
CGCTTTCATT TCCAGTTCTA CTACATGTCG CCGTTCTGGG GACGGCTGCT CGCCGGTCTC
GCGGCGATGG CCATGCTGGT GGCGATCGTC GCCGGCGTGA TCACCCACAA GAAGATCTTC
ACCGACTTCT TCACCTTCCG CTGGGGCAAG GGCCAGCGCT CCTGGCTCGA CGCGCACAAC
GCGCTGTCGG TGTTCGGGCT GCCGTTCCAT GTGATGATCA CCTACACCGG TCTGGTGACG
CTGATGGCGC TGTACGTGCC GTGGGGCGAG CGGGCCGCCA TCAAGACGCC GGCCGAGCGC
CAGCAGCTCA GCGCCGAACT CAATGCCTTC GCCCAGGCCG GCAAGCCGAG CGGCGAGACC
GTGCCGCTGG CGTCGATCGA GGCGATGGTC CGGCAGGCGC AGCAGCGCTG GGGGACGACC
GATGCGGGGC GCGTCAACGC CACCAATCCG GGCGACGCGA CGGCCCGCAT CGCGGTCACC
CGCGGTGATG CCGGGCGCGT GTCGATGAGC CCGGACTACA TCGAATTCGA CGGCGTCACC
GGGAAACTGC TCGCCGTGCA CGATCGCGTC GGCGCCGCTG CCGAGACCCG CGGCGTGCTG
TATGCGCTGC ATCTCGGCCG CTTCAGCGAC ATCGCGACGC GCTGGCTGTA TTTCCTGGTC
AGCCTGATGG GCACCGCGAT GGTCGGCACC GGGCTGGTGC TGTGGATCGT CAAGCGGCGG
GCGAAGCTGC CCGATCCGGA GCGGCCGTAT TTCGGCTTCC GTCTGGTCGA GCGGCTGAAC
ATCGCCAGCA TCGCCGGGCT GTCGATCGCG ATGACGGCGT TCCTGTGGGG CAACCGGCTG
CTGCCGGTCG CGATGGCGGA GCGGCCGTTC TGGGAAATCC ATGTCTTCTT CATCGTCTGG
GGGCTGACGC TGCTGCACGC GCTGCTGCGG CCGGCCAAGG CGGCGTGGCG CGAGCAGCTC
TGGACGGCGG CGGCGCTGCT GGCGCTGGTC CCCGTGCTCA ACGCGGTGAC GACGCAGCGG
CCGCTGTGGC GCAGCCTGGC CGAGGGCGAC TGGGAGTTCG CCGGAATCGA GCTGATGTGC
TGGGCACTGG CGGCGCTGCA CGCCGTGCTG GCGATCCGCA CGGCGCGGCA ACCGGCCGGC
GCGGCGGCGG GGCGCAAGGC CGAGCGGCGA TCGCCGATCG GCACCGCCGC CGGCGAGACC
GCGCCATGA
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| Protein sequence | MKPQNDQRVA GRGIRQSMSG LHTWAGLLLG WVLYAMFLTG TVSFFKEELS QWMRPEQPRL
TQPLDPAVVA QRVADEIGAI APGATQWSIK LPDGRSNTVY AFWRLPGGGP GARGFGQDLF
DPVTGHRVAA RLTLGGDFFY RFHFQFYYMS PFWGRLLAGL AAMAMLVAIV AGVITHKKIF
TDFFTFRWGK GQRSWLDAHN ALSVFGLPFH VMITYTGLVT LMALYVPWGE RAAIKTPAER
QQLSAELNAF AQAGKPSGET VPLASIEAMV RQAQQRWGTT DAGRVNATNP GDATARIAVT
RGDAGRVSMS PDYIEFDGVT GKLLAVHDRV GAAAETRGVL YALHLGRFSD IATRWLYFLV
SLMGTAMVGT GLVLWIVKRR AKLPDPERPY FGFRLVERLN IASIAGLSIA MTAFLWGNRL
LPVAMAERPF WEIHVFFIVW GLTLLHALLR PAKAAWREQL WTAAALLALV PVLNAVTTQR
PLWRSLAEGD WEFAGIELMC WALAALHAVL AIRTARQPAG AAAGRKAERR SPIGTAAGET
AP
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