| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3515 |
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| Symbol | |
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| ID | 3911317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4022926 |
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| End bp | 4024809 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885417 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_487121 |
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| Protein GI | 86750625 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.1939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.239363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGCCA ACCAGAAACG GGGGCGCTAC CTCCCGTCAC GAGCGACAGC GAGCGCGGAC
AGCGTGGCAC TATCCAGAAT CATCGGCGAG AGACTCGACG CTTTGCTGCA CCCGTCGGCG
CGTTACGACG CGCTCGCGAG TGCGCGGCAT CGCGCCTTCA TCGCGCCGCG GCTGTTCGGC
AGCCTCGCGG CGTTCGCCGC GTTTCCGATC TATCTGGCGA TGCGCGGCGC GCCGACCGCG
CTCGAGGCGC TGGCGTTCGC CTGGCTGATC GCGCCGATCC TGCTGTCGTG GTTCCTGTCG
CGCACCGGCC GCTACGAGAG CGCGCATGTG CTGTCGTCGC TGTCGCTGAC CGGCCTGATC
CTGGTGATCG CGACGCTCAC CGGCGGCATC ACCTCCTTCG CCGCGATCTG GCTGATCCTG
GTGCCGCTCG AGGCCGCGTT GTCGGCGTCG CGCCGCGTCG TCGCTTTCGC CGCGATGCTG
GCGCTCGGCG CCGCCGCCGT GCTGATCGCG ATCGGCCAGC TCGGCTGGCT GCCCGCGGCG
CCCGCCGGCG ACGTGTCGCA CGGCGCGCTG ATGGCGGTCA GCGTCGCATC GGCGACGCTG
TACGCGGCCG GTCTCGCGTT CGGATCGGAA TCGCTGACGC GCACCAGCGA CACGCTGCTC
AGCGTCGAGG AAGAGCGCTA CCGGCTGCTC GCCCGGCACA TGAGCGACGT GATTTCGCGC
CACGGCCGCA ACGGCGCGGT GCAGTTCATT TCGCCGGCGG TCGAAGCGCT GATCGGCGTG
CCTGCGTCGG CTCTGTCCGG GCACGGCCTG TTCGACCGCG TCCATGTCGC CGATCGCCCG
GCCTATCTCA AGGCGCTGTC GGACGCCGGC CGCGGCGGCG AAGCGCGCAG CGTCGAGTTC
CGCGTCCGCC GCGAAGTCGC GCGCGACGAT CGCGGCCGGC CGAGCGCGGC GGAATTCATC
TGGCTGGAGA TGCGCTGCCG GCCGTTCGAA ACCGGGGTCG TGAGCGCGGC GGGCGAGGCC
GACGTGGTCG CGGTGATGCG CGACGTCACC GACCGCAAGC AGCAGGAACA GGCGCTGGAG
GAGGCGCGCG CCGAGGCCGG CCGCGCCGAC GCCACCAAGA GCCGCTTCCT CGCCACCATG
AGCCACGAGC TGCGCACGCC GCTGAATGCG GTGATCGGCT TCTCCGACAT GATCCTGCAC
GAGGACGAGC TGATGCTCGC GCCGGAGCGT CGCAAGGAAT ACGCGCAGTT GATCAATGAT
TCCGGCCAGC ATCTGCTGTC GGTGGTCAAC GGCATCCTCG ATATGTCGAA GATCGAGTCC
GGCCATTTCG AGATCGCGCC GGAGCCGTTC GCGCCGCGGC CGGCGCTGCT GAATTGCTGC
AACCTGCTGG CGCTGAAAGC GCGCGAGAAC GGCATCGACC TGGTGACGCG CGCGCCGGAA
AACCTGCCGG AGATCGTCGG CGATCCGCGC GCGTTCAAGC AGATCCTGCT CAATCTGGTG
TCGAACGCGA TCAAGTTCAC CGAGCGCGGC GGCACCGTGT CGGTCGACGC GATGGTGGAA
GGCGCGCGGC TGGTGCTGCG GGTCAGCGAC ACCGGCGTCG GAATCGCGGC CGAGGATCTG
AAGCGGATCG GCGATCCGTT CTTCCAGGCC GGCACCACCT ATCAGCGCCG CCACGAAGGC
ACCGGCCTCG GCCTGTCGAT CGTCAAGAGC CTCGTCGGAA TGCACGGCGG CGACATCGAG
GTGAAAAGCG AGGTTGATCG GGGGACGACC GTCACGGTAT CGCTGCCGCT GGCGCAGCCG
GCGCTGACCA ACGTCACGCC GCTCGCGCCG CCGCAACCGA CAGAGCCGCA ACGGCCGGAC
TATCAGGTGA AGAAGAGTGC GTAA
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| Protein sequence | MGANQKRGRY LPSRATASAD SVALSRIIGE RLDALLHPSA RYDALASARH RAFIAPRLFG
SLAAFAAFPI YLAMRGAPTA LEALAFAWLI APILLSWFLS RTGRYESAHV LSSLSLTGLI
LVIATLTGGI TSFAAIWLIL VPLEAALSAS RRVVAFAAML ALGAAAVLIA IGQLGWLPAA
PAGDVSHGAL MAVSVASATL YAAGLAFGSE SLTRTSDTLL SVEEERYRLL ARHMSDVISR
HGRNGAVQFI SPAVEALIGV PASALSGHGL FDRVHVADRP AYLKALSDAG RGGEARSVEF
RVRREVARDD RGRPSAAEFI WLEMRCRPFE TGVVSAAGEA DVVAVMRDVT DRKQQEQALE
EARAEAGRAD ATKSRFLATM SHELRTPLNA VIGFSDMILH EDELMLAPER RKEYAQLIND
SGQHLLSVVN GILDMSKIES GHFEIAPEPF APRPALLNCC NLLALKAREN GIDLVTRAPE
NLPEIVGDPR AFKQILLNLV SNAIKFTERG GTVSVDAMVE GARLVLRVSD TGVGIAAEDL
KRIGDPFFQA GTTYQRRHEG TGLGLSIVKS LVGMHGGDIE VKSEVDRGTT VTVSLPLAQP
ALTNVTPLAP PQPTEPQRPD YQVKKSA
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