Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3501 |
Symbol | |
ID | 3911303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 4005281 |
End bp | 4006618 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637885403 |
Product | peptidase C14, caspase catalytic subunit p20 |
Protein accession | YP_487107 |
Protein GI | 86750611 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCGTT GGGCAATCGG AATTGCGCTG GCGGTGGTGG CTGCGCTCTG GCTGTCGCCG GCGCGCGCCG AAAAGCGCGT CGCGCTGGTG ATCGGCAATT CCGGCTATCA GAACGTGTCG CGGCTCGACA ATCCGAAGAA CGACGCGGTG CTGATGGCGG AGACGCTGAG TGTGATCGGC TTCACGCTGG TCGGCGGCCG CGCCCAGCTC GATCTCGACA AGCCGTCGCT GGATTCCGCG GTGCAGAATT TCGGCCGACA GATCCAGGGC GCCGACGTCG CGCTATTCTA CTTTGCCGGC CACGGCGTGC AGATCAGCGG CGCCAATTAT CTGGTGCCGG TCAACGCCAA TCCGACCCGC GAGGCCGACG TCGATTTCCA GATGGTCGAC GTCAACGTCG TGCTGCGGCA GATGCAGGCG GCCGGAACGC GGCTGAAGAT CGTCATTCTC GACGCCTGCC GCAACAACCC GTTCGGCGCG CGAGGACTGC GATCCTCCGA AGGTGGCCTC GCGCAGATGC GCGCGCCCGA CGGCACGCTG ATTTCCTACG CGACCCAGCC CGGCAGCGTC GCGCTCGACG GCGGCGATGG CCACAGCCCG TATACGCGCG CGCTGGCGGC GACGGTGAAG CGGGCCGGGC TCGATCTGTT CCAGACCTTC AATCAGGTCG GCCTCGCGGT GATGCGTGCG ACCGGCGGCG CTCAGCAGCC CTGGGTGTCG TCGTCGCCGA TCGACGGCAC GTTCTACTTC GTCGCGCCGG CGCTGCCGCT GCCGCCCGCG TCGCCGTCGC CGATGCAGGA GGCGCGACTG AGCGAGACCC CGCGTCGCGA TCCCGATCGC GCGCCGCTGA CCGATGCCGG TGCGCTGCGC GAACTGCGCG ACCGGCTGTA CGAACGCAAT TTCGATCCCG ACGTGCCGGA CGACAAAGCC GGCTTGCGCA CGGCGATCGC CAAGTTCCAG GAGAAGGCGG CGCTGCCGCA GACCGGGGAG GCGACCGAAG GCGTGCTCGC GCGGCTGCGG CAGACCGACG ATCTGAAGCC GTGGGGATCG ATCGTGTACG ACCCGGACAA CGAGAAGTGG GGAATGTCCT GGAACCACGC GTCGCGGAAA GCCGCGGTGT CGGACGCCGG CGCGAAATGC AGCGGCGCGC CGTGCAAGGT CGAACTCAGC TTCTACGGCC AGCGCTGCGG CGCCTTCGCG GTGTCGGCGA TGGCGTGGTC GCTGGTCGAC CGCGACAGCG TCCAGGCGGC GAAGGATGCC GCGCTCAGCG CCTGCGGCAA GTCCGGCAAG CCGTGCCGCG TGATCGGCGC GGTCTGCGCC GACGGCTCCG GCCGCTGA
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Protein sequence | MERWAIGIAL AVVAALWLSP ARAEKRVALV IGNSGYQNVS RLDNPKNDAV LMAETLSVIG FTLVGGRAQL DLDKPSLDSA VQNFGRQIQG ADVALFYFAG HGVQISGANY LVPVNANPTR EADVDFQMVD VNVVLRQMQA AGTRLKIVIL DACRNNPFGA RGLRSSEGGL AQMRAPDGTL ISYATQPGSV ALDGGDGHSP YTRALAATVK RAGLDLFQTF NQVGLAVMRA TGGAQQPWVS SSPIDGTFYF VAPALPLPPA SPSPMQEARL SETPRRDPDR APLTDAGALR ELRDRLYERN FDPDVPDDKA GLRTAIAKFQ EKAALPQTGE ATEGVLARLR QTDDLKPWGS IVYDPDNEKW GMSWNHASRK AAVSDAGAKC SGAPCKVELS FYGQRCGAFA VSAMAWSLVD RDSVQAAKDA ALSACGKSGK PCRVIGAVCA DGSGR
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