Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3447 |
Symbol | |
ID | 3911249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3952800 |
End bp | 3953300 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637885350 |
Product | cytochrome C biogenesis protein |
Protein accession | YP_487054 |
Protein GI | 86750558 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.345462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0741818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAAAGC TCGCGACAAT CATATGCCTC GCCATCACGA TGCTGGCCGT CGCCATCCCG CTGGCGCACG CCGTGCAGCC CGACGAGGTG ATGACCGATC CGGCGCAGGA GGCGCGGGCG CGGGAATTGT CGCGCGAACT GCGCTGCATG GTCTGTCAGA ACCAGTCGAT CGACGATTCC GATGCGACGC TCGCCAAGGA TCTGCGGCTG CTGGTGCGCG AGCGGATCGC GGCCGGCGAC AGCAACAATC AGGTGCTGGA CTATCTGGTC GCGCGCTACG GCGAGTTCGT GCTGCTGAAG CCGCGGTTCG AAAGCCACAC GCTGGTGCTG TGGCTGGTGA CGCCGCTGGT GCTGTTCGGC GGCGGGCTGG CGCTGTGGCT GCACGTCCGC CGCCGCGCCC GCGGCGCGGC CCGTGAGCTG GAGACGACGC AACCGCTCAG CGCCGAGGAG CAGGCGCGGC TCGATCGGCT GATGGCGGAG GGGCCGGATC GGTCGGCGTA G
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Protein sequence | MRKLATIICL AITMLAVAIP LAHAVQPDEV MTDPAQEARA RELSRELRCM VCQNQSIDDS DATLAKDLRL LVRERIAAGD SNNQVLDYLV ARYGEFVLLK PRFESHTLVL WLVTPLVLFG GGLALWLHVR RRARGAAREL ETTQPLSAEE QARLDRLMAE GPDRSA
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