Gene RPB_3445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3445 
Symbol 
ID3911247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3951569 
End bp3952057 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID637885348 
Producthypothetical protein 
Protein accessionYP_487052 
Protein GI86750556 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.35818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0368438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG TCGAAGAGTT TCTGGCGCAC TCGATCCGCC TCGAACAGGA AGCGGCTCTG 
CGCTTCGGTC AGCTCGCAGA CGCGATGGAC AGCTGCGGCA ACAAGGAAGT CTCCAAGCTG
TTCCGGCAGC TCGCCGACTA CTCGCGCATG CACCAGGCCG ATGCCCAGGC CCGTGCCGGC
TTCCGCGAGA TTCCCGAGAT GGAGACCGTC GATTTCAAAT GGCCCGGCGA CGAAAGCCCG
GAGACCGCGG CGATCTGGGG CACCGACCCG TTCATCGGCC GCGACCTGGC GCTGGAAATC
GCGCTGGAAG CCGAGACCGG CGCCTTTGAT TGGTACAAGA ACGTGCTCGA CACCACCGAC
AATCCGGAGA TCCGGGCGCT GGCGAAAGAG TTCGTCGCCG AGGAAAGCGG CCACGTCGCC
GAGCTGCACC GCTGGATCGC CCTGCACAAG GCCGGCAAAC CGCTGCCGAT GGAGATCACG
CCGTTCTGA
 
Protein sequence
METVEEFLAH SIRLEQEAAL RFGQLADAMD SCGNKEVSKL FRQLADYSRM HQADAQARAG 
FREIPEMETV DFKWPGDESP ETAAIWGTDP FIGRDLALEI ALEAETGAFD WYKNVLDTTD
NPEIRALAKE FVAEESGHVA ELHRWIALHK AGKPLPMEIT PF