Gene RPB_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3415 
Symbol 
ID3911217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3903259 
End bp3903564 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content66% 
IMG OID637885318 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_487022 
Protein GI86750526 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.727603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.633009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTATG TGGTTACGGA CAATTGCAAA GGCTGTCGCT ACACCGAGTG CGTCACGGTC 
TGTCCGGTCG AGTGCTTCCA CGTCGACGCC GCGATGACCT ATATCGATCC GGAGAACTGC
ATCGATTGCG GCGGCTGTGC GCCGGCCTGT CCGGTCGGGG CGATCGCGCC GGACTACCGG
CTGCCGGCGC ATCAGAAATT CTGGATCGAC GTCAACCGCA AGCGTGCCGC TGAAACGCCG
GTGCTCACCG CGCGGCTGCC GCCGCTGCCC GGCGCCGACG ACCGCAGGCA GGCGCTGGGC
CGATGA
 
Protein sequence
MTYVVTDNCK GCRYTECVTV CPVECFHVDA AMTYIDPENC IDCGGCAPAC PVGAIAPDYR 
LPAHQKFWID VNRKRAAETP VLTARLPPLP GADDRRQALG R