Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3405 |
Symbol | |
ID | 3911207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 3891189 |
End bp | 3892046 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637885308 |
Product | hypothetical protein |
Protein accession | YP_487012 |
Protein GI | 86750516 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.555758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC TGTTCGACTG GTTCGCCGGG CCGCTGGCCT ATCCCTTCAT GCAGCGCGCG CTGGTGATAT CGGTGATGGT CGCGGCGGTC TGCGCCGTGC TGTCCTGCTA CCTGGTGCTC AAGGGCTGGT CGCTGATGGG CGACGCCGTC TCCCACGCGG TGCTGCCCGG CATCGTGCTC GCCCATGTGC TGAACCTGCC CTACGCGATC GGCGCGTTCG CTGCCGGCCT GTCCTGCGCG GTGTTCACCG GATATTTGAC CGCGAACAGC CGGGTGAAGG AGGACACGGT GATGGGCATC GTGTTTTCCG GCATGTTCGG CCTCGGCCTC GTGATGTTCA CCAAGATCGA GACCGACCAG CATCTCAACC ACATCCTGTT CGGAAACGTT CTCGGCGTCA CGCCGCGCGA CCTGATCGAA ACGGCGATCG TCGCCGGCGG CACGCTGCTC GTCGTGCTGC TGAAAGGCCG CGATCTGCTG CTCTACTGCT TCGATCCCAA CCACGCCCGC TCGATCGGCC TGCCGGTCGT CTGGCTGCAT TACGGGCTGC TGGTGCTGCT CGCGCTGACC ATCGTCGCGT CGCTGAAGGC GGTCGGGATC ATCCTGGTCG TGGCGATGCT GGTCGCGCCC GGCGCTACCG CCTATCTGCT GACCGACAGC TTCGACCGCA TGCTGGTGAT CGCCACCGTC GTCGCGACCA GCTCGGCCGC GCTCGGGACG CTGATCAGCT TCCATATCGA CGGCGCGACC GGCGCCTGCA TCGTGCTGAC CCAGGCGGTG GTCTTCGTGC TGGCGTTTCT GTTTGCGCCG AAGCGGGGTC TGTTACGACA GGCCGGCGGA GTCGGCAGCC GCCCCTGA
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Protein sequence | MSELFDWFAG PLAYPFMQRA LVISVMVAAV CAVLSCYLVL KGWSLMGDAV SHAVLPGIVL AHVLNLPYAI GAFAAGLSCA VFTGYLTANS RVKEDTVMGI VFSGMFGLGL VMFTKIETDQ HLNHILFGNV LGVTPRDLIE TAIVAGGTLL VVLLKGRDLL LYCFDPNHAR SIGLPVVWLH YGLLVLLALT IVASLKAVGI ILVVAMLVAP GATAYLLTDS FDRMLVIATV VATSSAALGT LISFHIDGAT GACIVLTQAV VFVLAFLFAP KRGLLRQAGG VGSRP
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