Gene RPB_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3381 
SymbolnadE 
ID3911183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3864911 
End bp3866668 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content68% 
IMG OID637885284 
ProductNAD synthetase 
Protein accessionYP_486988 
Protein GI86750492 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0171] NAD synthase
[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000863364 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0990163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA CAGCCGCCCG TTTCACGATC TCGCTCGCCC AGCTCAATCC GACGGTCGGC 
GACATCACCG GCAACGCCGC GATGGCGCGC GCGGCGCGTG CGCAGGCCGC GGCCGAGAAC
GCCGATGTCA TCGTCTTTCC CGAGCTGTTC ATCTCCGGCT ATCCGCCGGA AGATCTGGTG
CTGAAGCCGG CGTTTCAGGC CGCGTGCCGC GCGGCGGTCG AGGAACTGGC GCGCGAGACC
GCCGATGGCG GGCCGGCAAT GCTGATCGGC TCGCCCTGGG TCGACGGCGG CAAGCTCTAC
AACGCCTGCG CATTGCTCGA CGGCGGCCGC ATCGCGGCGA TCCGCTTCAA GGTCAATCTG
CCGAACTACG GCGTGTTCGA CGAGAAGCGC GTGTTCGCGC GCGGGCCGGT GGCGGGTCCG
GTGACGATCC GCGGCGTCCG CGTCGGCGTG CCGATCTGCG AGGACACCTG GCTCGAGGAG
TCCGAGGACT ACGAGAACGT CGTCGAGTGC TTGGCCGAGA CCGGCGCCGA AATCCTGATC
GTGCCGAACG GCTCACCCTA CGCGCGCGGC AAGGGCGATC TGCGGCTGTC GGTGCAGGTC
GCCCGCGTCA CCGAGAGCGA TCTGCCGCTG GTCTATCTCA ATCAGGTCGG CGGCCAGGAC
GAACTGGTGT TCGACGGCGC ATCCTTTGCG CTCAACGCCG ACCGCTCGCT CGCCGCGCAA
CTCCCCGCCT TCGCCGAATG CATCACCACG CTGGTCTGGC AGAAGAGCGC GGATGGCTGG
CGCTGCGATG GCCCGGTGGC GGCGGTGCCC GACGGCGACG AGGGCGACTA CGCCGCCTGC
GTGCTGGGGC TACGCGACTA CGTCCGCAAG AACGGTTTCC CCGGTGTGCT GCTCGGCATC
TCCGGCGGCA TCGATTCCGC GCTGTGCGCC GCGATCGCGG TCGATGCGCT CGGCGCGGGC
AGGGTCCGCG GCGTGATGCT GCCGTTCCGC TACACCGCGC AGATCTCGCT CGACGATGCC
AGTAGGCTCG CGAATGCGCT GGGCTTCGGC TACGAGGTGC TGCCGATCGC TCAGGCGGTG
GAAGGCTTCG AGGCGATCCT GGCGAAGCCG TTCGCCGGCC TCGCGCGCGA CATCACCGAA
GAAAACCTGC AGGCGCGCAC CCGCGGCACG CTGCTGATGG CGATCTCCAA CAAGACCGGC
GCGATGGTGG TCACCACGGG TAACAAGTCG GAAATGAGCG TCGGCTACGC CACGCTGTAT
GGCGACATGA ACGGCGGCTT CAATCCGATC AAGGACATCT ACAAGACGCA AGTGTTCCGC
CTCTCCAGCC TGCGCAATCG CTGGAAGCCC GACGGCGCGC TCGGCCCCGA CGGTGAGGTG
ATCCCGGAAA GCATCATCGT CCGTCCGCCG ACCGCGGAAC TGCGTGAAAA CCAGACCGAC
CAGGATTCGC TGCCGCCCTA CGAGGTGCTC GACGCCATCC TCGAACGCCT GGTCGAACGC
GAGCAGCCGC TGGCGTCGAT CGTCGCCGAG GGCTTCGACA AGGACACCGT GATGCGGATC
GACCGCCTCC TCAACATCGC CGAATACAAG CGCCGCCAGG CCGCCCCCGG CGTCAAGGTG
ACCCGCAAGA ACTTCGGCCG CGACCGCCGC TACCCGATCA CCAACCGTTT TCGCGACAAG
GCCGAGGCGC TGGCCGAGCC GGACGAGGCG CTGGTGATGC GGGCAGGGCG TGCGTCGAGC
GAGGCGTTCG AGGGGTAG
 
Protein sequence
MTNTAARFTI SLAQLNPTVG DITGNAAMAR AARAQAAAEN ADVIVFPELF ISGYPPEDLV 
LKPAFQAACR AAVEELARET ADGGPAMLIG SPWVDGGKLY NACALLDGGR IAAIRFKVNL
PNYGVFDEKR VFARGPVAGP VTIRGVRVGV PICEDTWLEE SEDYENVVEC LAETGAEILI
VPNGSPYARG KGDLRLSVQV ARVTESDLPL VYLNQVGGQD ELVFDGASFA LNADRSLAAQ
LPAFAECITT LVWQKSADGW RCDGPVAAVP DGDEGDYAAC VLGLRDYVRK NGFPGVLLGI
SGGIDSALCA AIAVDALGAG RVRGVMLPFR YTAQISLDDA SRLANALGFG YEVLPIAQAV
EGFEAILAKP FAGLARDITE ENLQARTRGT LLMAISNKTG AMVVTTGNKS EMSVGYATLY
GDMNGGFNPI KDIYKTQVFR LSSLRNRWKP DGALGPDGEV IPESIIVRPP TAELRENQTD
QDSLPPYEVL DAILERLVER EQPLASIVAE GFDKDTVMRI DRLLNIAEYK RRQAAPGVKV
TRKNFGRDRR YPITNRFRDK AEALAEPDEA LVMRAGRASS EAFEG