Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3381 |
Symbol | nadE |
ID | 3911183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3864911 |
End bp | 3866668 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637885284 |
Product | NAD synthetase |
Protein accession | YP_486988 |
Protein GI | 86750492 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0171] NAD synthase [COG0388] Predicted amidohydrolase |
TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000863364 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0990163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACA CAGCCGCCCG TTTCACGATC TCGCTCGCCC AGCTCAATCC GACGGTCGGC GACATCACCG GCAACGCCGC GATGGCGCGC GCGGCGCGTG CGCAGGCCGC GGCCGAGAAC GCCGATGTCA TCGTCTTTCC CGAGCTGTTC ATCTCCGGCT ATCCGCCGGA AGATCTGGTG CTGAAGCCGG CGTTTCAGGC CGCGTGCCGC GCGGCGGTCG AGGAACTGGC GCGCGAGACC GCCGATGGCG GGCCGGCAAT GCTGATCGGC TCGCCCTGGG TCGACGGCGG CAAGCTCTAC AACGCCTGCG CATTGCTCGA CGGCGGCCGC ATCGCGGCGA TCCGCTTCAA GGTCAATCTG CCGAACTACG GCGTGTTCGA CGAGAAGCGC GTGTTCGCGC GCGGGCCGGT GGCGGGTCCG GTGACGATCC GCGGCGTCCG CGTCGGCGTG CCGATCTGCG AGGACACCTG GCTCGAGGAG TCCGAGGACT ACGAGAACGT CGTCGAGTGC TTGGCCGAGA CCGGCGCCGA AATCCTGATC GTGCCGAACG GCTCACCCTA CGCGCGCGGC AAGGGCGATC TGCGGCTGTC GGTGCAGGTC GCCCGCGTCA CCGAGAGCGA TCTGCCGCTG GTCTATCTCA ATCAGGTCGG CGGCCAGGAC GAACTGGTGT TCGACGGCGC ATCCTTTGCG CTCAACGCCG ACCGCTCGCT CGCCGCGCAA CTCCCCGCCT TCGCCGAATG CATCACCACG CTGGTCTGGC AGAAGAGCGC GGATGGCTGG CGCTGCGATG GCCCGGTGGC GGCGGTGCCC GACGGCGACG AGGGCGACTA CGCCGCCTGC GTGCTGGGGC TACGCGACTA CGTCCGCAAG AACGGTTTCC CCGGTGTGCT GCTCGGCATC TCCGGCGGCA TCGATTCCGC GCTGTGCGCC GCGATCGCGG TCGATGCGCT CGGCGCGGGC AGGGTCCGCG GCGTGATGCT GCCGTTCCGC TACACCGCGC AGATCTCGCT CGACGATGCC AGTAGGCTCG CGAATGCGCT GGGCTTCGGC TACGAGGTGC TGCCGATCGC TCAGGCGGTG GAAGGCTTCG AGGCGATCCT GGCGAAGCCG TTCGCCGGCC TCGCGCGCGA CATCACCGAA GAAAACCTGC AGGCGCGCAC CCGCGGCACG CTGCTGATGG CGATCTCCAA CAAGACCGGC GCGATGGTGG TCACCACGGG TAACAAGTCG GAAATGAGCG TCGGCTACGC CACGCTGTAT GGCGACATGA ACGGCGGCTT CAATCCGATC AAGGACATCT ACAAGACGCA AGTGTTCCGC CTCTCCAGCC TGCGCAATCG CTGGAAGCCC GACGGCGCGC TCGGCCCCGA CGGTGAGGTG ATCCCGGAAA GCATCATCGT CCGTCCGCCG ACCGCGGAAC TGCGTGAAAA CCAGACCGAC CAGGATTCGC TGCCGCCCTA CGAGGTGCTC GACGCCATCC TCGAACGCCT GGTCGAACGC GAGCAGCCGC TGGCGTCGAT CGTCGCCGAG GGCTTCGACA AGGACACCGT GATGCGGATC GACCGCCTCC TCAACATCGC CGAATACAAG CGCCGCCAGG CCGCCCCCGG CGTCAAGGTG ACCCGCAAGA ACTTCGGCCG CGACCGCCGC TACCCGATCA CCAACCGTTT TCGCGACAAG GCCGAGGCGC TGGCCGAGCC GGACGAGGCG CTGGTGATGC GGGCAGGGCG TGCGTCGAGC GAGGCGTTCG AGGGGTAG
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Protein sequence | MTNTAARFTI SLAQLNPTVG DITGNAAMAR AARAQAAAEN ADVIVFPELF ISGYPPEDLV LKPAFQAACR AAVEELARET ADGGPAMLIG SPWVDGGKLY NACALLDGGR IAAIRFKVNL PNYGVFDEKR VFARGPVAGP VTIRGVRVGV PICEDTWLEE SEDYENVVEC LAETGAEILI VPNGSPYARG KGDLRLSVQV ARVTESDLPL VYLNQVGGQD ELVFDGASFA LNADRSLAAQ LPAFAECITT LVWQKSADGW RCDGPVAAVP DGDEGDYAAC VLGLRDYVRK NGFPGVLLGI SGGIDSALCA AIAVDALGAG RVRGVMLPFR YTAQISLDDA SRLANALGFG YEVLPIAQAV EGFEAILAKP FAGLARDITE ENLQARTRGT LLMAISNKTG AMVVTTGNKS EMSVGYATLY GDMNGGFNPI KDIYKTQVFR LSSLRNRWKP DGALGPDGEV IPESIIVRPP TAELRENQTD QDSLPPYEVL DAILERLVER EQPLASIVAE GFDKDTVMRI DRLLNIAEYK RRQAAPGVKV TRKNFGRDRR YPITNRFRDK AEALAEPDEA LVMRAGRASS EAFEG
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