Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_3367 |
Symbol | |
ID | 3911169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 3849440 |
End bp | 3850138 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637885270 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_486974 |
Protein GI | 86750478 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0111385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTCG TCAATTCTAT CCGCGCCCAG ATCCCGCCGA TTCATCGGGA AGGCTATCCG TTCATCGGCG CGTTCGCGCT CGCGACCCTG GTGCTGTTCC TGATCTGGGC CCCGCTCGGC TGGATCGGGA CCGTGCTGAC GATCTGGTGC CTGCTGTTCT TTCGCGATCC GGTGCGGGTG ACGCCGGTGC GTGAAGGTCT GGTGGTGGCC CCGGCCGATG GCCGGGTGTC GATGGTGGTG CAGATCATTC CGCCGCCGGC GCTGGGGCTC GGCGACAAGC CGCTGCCGCG CGTCTCGATT TTCATGAGTG TGTTCAACTG CCATGTGAAC CGCAGCCCGG TGGCCGGCCG GGTCGAGCGC ATCATCTATT CGCCGGGCAA GTTCATCAAC GCCGAGCTCG ACAAGGCGAG CGAGGACAAC GAGCGCAACT CGCTGGTGAT CTCGACGCCG GCCGGGCAGA TCGGCGTGGT TCAGATCGCC GGGCTGGTGG CGCGGCGGAT CGTCGCGTTC GTCCGCGAGG GCCAGCCGCT GGCGGCCGGC GAGCGGTTCG GCCTGATCCG GTTCGGATCG CGGCTCGACG TTTACCTGCC GGAAGGCGCC AAGCCGCTAG TGTCCGAAGG GCAGACGGCG ATCGCCGGCG AAACCGTGCT GGCGGATTTC AGCCTCGGCG ACGGTGGCCG GACCTATCGG GCCGATTGA
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Protein sequence | MSVVNSIRAQ IPPIHREGYP FIGAFALATL VLFLIWAPLG WIGTVLTIWC LLFFRDPVRV TPVREGLVVA PADGRVSMVV QIIPPPALGL GDKPLPRVSI FMSVFNCHVN RSPVAGRVER IIYSPGKFIN AELDKASEDN ERNSLVISTP AGQIGVVQIA GLVARRIVAF VREGQPLAAG ERFGLIRFGS RLDVYLPEGA KPLVSEGQTA IAGETVLADF SLGDGGRTYR AD
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