Gene RPB_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3299 
Symbol 
ID3911100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3769317 
End bp3770180 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content68% 
IMG OID637885201 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_486906 
Protein GI86750410 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.382633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCT TCGCTGACAT CATCCCGAAC GCAAAGCGCC TCGCTGCGGT CGAGCAGGCC 
GATGGCATCG GGCGGACCGT TCTCCACGTC GCCGAGATCG ACAGCACCAA TCGGGCTCTG
ATCGATCTCG GCAAGGCCGG CGCCGACCAC GGCACCGTCC TCGTCGCCGA TCATCAGACC
CGCGGCCGCG GCAAGGGCAG CCGCGCCTGG TTTTCCCAGC CGTCGGGAAG TCTGTGTGTC
TCGACACTGA TCCGCACCGC GCGGCCGATC GAGGAGGCGC CGCAATTGGC CCTGCTCGGC
GCCGTCGCGC TGTGGGAAGC GATCGCGGCC CACACCGGCG TTGCCGCCGG CATCAAATGG
CCGAACGACC TGTTGGTCGA CGGCCGCAAG ATCTGCGGCA TCCTGGCCGA AGCGCACACC
GACGGCGCGG GCGAGCTCGA CTTCGTCGTG CTCGGCTTTG GCCTGAACGT CGCGATCGCG
CAGGCGGAGT TTCCCGAAGA GCTACGTCGT TCTGCAGCGT CGCTCGCGGC GCTGGCGGGT
CGGCCGATCG ATCCGATCGG ACTGCTGAGA GGCTTCCTGG AGTCGCTCGG GGTGTGGCTG
CCGCTGTGGG AACGCGACGG TGTCGCGTCG TTCGCCGGCA CCTGGACCCG GCACGCCGAA
CATCTCGGCC AAATGGTTCG CGTCACCGAC GGTGACGAAC CCGTCACGGC ACGACTGATC
GGCCTCGCCG ACGATGGCGC TCTTCGAATT CTAGACGAGA CGGGCGTCAC CCGCCTCGTT
CACTCCGGCG AAATCGCCAC GGGCATCTCC GTTGGCCGGG GGCCCGACTA CATCTCCACG
AAGCACACGG GTGTAAGCTC ATGA
 
Protein sequence
MVRFADIIPN AKRLAAVEQA DGIGRTVLHV AEIDSTNRAL IDLGKAGADH GTVLVADHQT 
RGRGKGSRAW FSQPSGSLCV STLIRTARPI EEAPQLALLG AVALWEAIAA HTGVAAGIKW
PNDLLVDGRK ICGILAEAHT DGAGELDFVV LGFGLNVAIA QAEFPEELRR SAASLAALAG
RPIDPIGLLR GFLESLGVWL PLWERDGVAS FAGTWTRHAE HLGQMVRVTD GDEPVTARLI
GLADDGALRI LDETGVTRLV HSGEIATGIS VGRGPDYIST KHTGVSS